home *** CD-ROM | disk | FTP | other *** search
open in:
MacOS 8.1
|
Win98
|
DOS
view JSON data
|
view as text
This file was processed as: MacOS Resource Fork
(archive/rsrc).
You can browse this item here: Help File.rsrc
id metadata |
---|
key | value |
---|
macFileType | [HELP] |
macFileCreator | [RICK] |
hex view+--------+-------------------------+-------------------------+--------+--------+
|00000000| 00 05 16 07 00 02 00 00 | 00 00 00 00 00 00 00 00 |........|........|
|00000010| 00 00 00 00 00 00 00 00 | 00 02 00 00 00 09 00 00 |........|........|
|00000020| 00 32 00 00 00 20 00 00 | 00 02 00 00 00 52 00 00 |.2... ..|.....R..|
|00000030| 8d fc 48 45 4c 50 52 49 | 43 4b 01 00 00 00 00 00 |..HELPRI|CK......|
|00000040| 00 00 00 00 00 00 00 00 | 00 00 00 00 00 00 00 00 |........|........|
|00000050| 00 00 00 00 01 00 00 00 | 85 72 00 00 84 72 00 00 |........|.r...r..|
|00000060| 08 8a ff d8 4e ba f5 3e | 60 08 48 6e ff d8 4e ba |....N..>|`.Hn..N.|
|00000070| f3 ea 48 6e ff d8 3f 2e | ff fe 4e ba fa ac df 6e |..Hn..?.|..N....n|
|00000080| ff fe 09 48 65 6c 70 20 | 46 69 6c 65 02 00 00 00 |...Help |File....|
|00000090| 48 45 4c 50 52 49 43 4b | 01 00 00 00 00 c0 00 14 |HELPRICK|........|
|000000a0| 00 00 00 00 48 45 4c 50 | 52 49 43 4b 01 00 00 00 |....HELP|RICK....|
|000000b0| 00 c0 00 14 29 98 00 00 | 00 00 00 00 00 00 00 00 |....)...|........|
|000000c0| 00 00 00 00 9a 5c 48 00 | 00 00 00 00 00 00 8d fc |.....\H.|........|
|000000d0| 0c 28 00 01 00 44 66 2c | 20 6d fe fa 20 50 3d 68 |.(...Df,| m.. P=h|
|000000e0| 00 42 fe 98 7a 01 60 16 | 2f 2d fe fa 42 a7 42 a7 |.B..z.`.|/-..B.B.|
|000000f0| 42 a7 48 6e ff ae 4e ad | 02 02 52 45 69 06 ba 6e |B.Hn..N.|..REi..n|
|00000100| fe 98 6f e4 4e ad 01 d2 | 2f 0c a9 83 2f 2e ff f2 |..o.N...|/.../...|
|00000110| a8 73 42 a7 a9 24 a9 22 | 42 a7 a9 24 a9 81 48 6e |.sB..$."|B..$..Hn|
|00000120| ff d0 4e ba f2 18 10 2d | f2 9c 67 0a 48 6e ff d0 |..N....-|..g.Hn..|
|00000130| 4e ba f4 72 60 08 48 6e | ff d0 4e ba f3 1e 48 6e |N..r`.Hn|..N...Hn|
|00000140| ff d0 42 67 2f 2e ff cc | a9 60 4e ba f9 dc 42 a7 |..Bg/...|.`N...B.|
|00000150| a9 24 00 00 00 93 54 68 | 69 73 20 69 73 20 61 20 |.$....Th|is is a |
|00000160| 66 61 69 72 6c 79 20 73 | 74 61 6e 64 61 72 64 20 |fairly s|tandard |
|00000170| 6d 65 6e 75 2e 20 20 54 | 68 72 6f 75 67 68 20 74 |menu. T|hrough t|
|00000180| 68 69 73 20 6d 65 6e 75 | 20 79 6f 75 20 63 61 6e |his menu| you can|
|00000190| 20 63 72 65 61 74 65 2c | 20 72 65 6d 6f 76 65 2c | create,| remove,|
|000001a0| 20 73 61 76 65 20 61 6e | 64 20 70 72 69 6e 74 20 | save an|d print |
|000001b0| 6d 6f 6c 65 63 75 6c 65 | 73 2e 20 20 59 6f 75 20 |molecule|s. You |
|000001c0| 6d 61 79 20 61 6c 73 6f | 20 6c 65 61 76 65 20 74 |may also| leave t|
|000001d0| 68 65 20 70 72 6f 67 72 | 61 6d 20 69 6e 20 74 68 |he progr|am in th|
|000001e0| 69 73 20 6d 65 6e 75 2e | 00 00 00 00 d4 54 68 69 |is menu.|.....Thi|
|000001f0| 73 20 6d 65 6e 75 20 63 | 6f 6e 74 72 6f 6c 73 20 |s menu c|ontrols |
|00000200| 74 68 65 20 61 70 70 65 | 61 72 61 6e 63 65 20 6f |the appe|arance o|
|00000210| 66 20 74 68 65 20 6d 6f | 6c 65 63 75 6c 65 2e 20 |f the mo|lecule. |
|00000220| 20 59 6f 75 20 63 61 6e | 20 63 68 61 6e 67 65 20 | You can| change |
|00000230| 77 68 61 74 20 69 73 20 | 73 65 65 6e 20 62 79 20 |what is |seen by |
|00000240| 74 68 65 20 53 65 74 74 | 69 6e 67 73 20 6f 70 74 |the Sett|ings opt|
|00000250| 69 6f 6e 2c 20 74 68 65 | 20 73 69 7a 65 20 6f 66 |ion, the| size of|
|00000260| 20 74 68 65 20 6d 6f 6c | 65 63 75 6c 65 20 77 69 | the mol|ecule wi|
|00000270| 74 68 20 74 68 65 20 73 | 63 61 6c 65 20 6f 70 74 |th the s|cale opt|
|00000280| 69 6f 6e 73 2c 20 61 6e | 64 20 74 68 65 20 76 69 |ions, an|d the vi|
|00000290| 65 77 69 6e 67 20 70 65 | 72 73 70 65 63 74 69 76 |ewing pe|rspectiv|
|000002a0| 65 20 77 69 74 68 20 74 | 68 65 20 56 69 65 77 69 |e with t|he Viewi|
|000002b0| 6e 67 20 41 6e 67 6c 65 | 20 6f 70 74 69 6f 6e 2e |ng Angle| option.|
|000002c0| 00 00 00 00 a2 49 6e 20 | 74 68 69 73 20 6d 65 6e |.....In |this men|
|000002d0| 75 20 79 6f 75 20 63 61 | 6e 20 70 65 72 66 6f 72 |u you ca|n perfor|
|000002e0| 6d 20 73 6f 6d 65 20 63 | 61 6c 63 75 6c 61 74 69 |m some c|alculati|
|000002f0| 6f 6e 73 20 6f 6e 20 61 | 20 6d 6f 6c 65 63 75 6c |ons on a| molecul|
|00000300| 65 3a 20 20 74 68 65 20 | 64 69 73 74 61 6e 63 65 |e: the |distance|
|00000310| 20 62 65 74 77 65 65 6e | 20 74 77 6f 20 61 74 6f | between| two ato|
|00000320| 6d 73 2c 20 20 74 68 65 | 20 61 6e 67 6c 65 20 62 |ms, the| angle b|
|00000330| 65 74 77 65 65 6e 20 74 | 77 6f 20 62 6f 6e 64 73 |etween t|wo bonds|
|00000340| 2c 20 6f 72 20 20 74 68 | 65 20 74 6f 72 73 69 6f |, or th|e torsio|
|00000350| 6e 20 61 6e 67 6c 65 20 | 61 72 6f 75 6e 64 20 61 |n angle |around a|
|00000360| 20 62 6f 6e 64 2e 00 00 | 00 00 a0 4f 70 65 6e 20 | bond...|...Open |
|00000370| 61 6c 6c 6f 77 73 20 61 | 20 70 72 65 76 69 6f 75 |allows a| previou|
|00000380| 73 6c 79 20 73 61 76 65 | 64 20 6d 6f 6c 65 63 75 |sly save|d molecu|
|00000390| 6c 65 20 74 6f 20 62 65 | 20 6c 6f 61 64 65 64 20 |le to be| loaded |
|000003a0| 69 6e 74 6f 20 74 68 65 | 20 57 6f 72 6b 73 68 65 |into the| Workshe|
|000003b0| 65 74 2c 20 70 6c 61 63 | 69 6e 67 20 69 74 20 61 |et, plac|ing it a|
|000003c0| 66 74 65 72 20 74 68 65 | 20 63 75 72 72 65 6e 74 |fter the| current|
|000003d0| 20 6f 6e 65 2c 20 6f 72 | 20 69 66 20 74 68 65 20 | one, or| if the |
|000003e0| 73 68 69 66 74 20 6b 65 | 79 20 69 73 20 64 6f 77 |shift ke|y is dow|
|000003f0| 6e 2c 20 62 65 66 6f 72 | 65 20 74 68 65 20 63 75 |n, befor|e the cu|
|00000400| 72 72 65 6e 74 20 6f 6e | 65 2e 00 00 00 00 8a 52 |rrent on|e......R|
|00000410| 65 6d 6f 76 65 73 20 74 | 68 65 20 6d 6f 6c 65 63 |emoves t|he molec|
|00000420| 75 6c 65 20 66 72 6f 6d | 20 74 68 65 20 61 63 74 |ule from| the act|
|00000430| 69 76 65 20 6c 69 73 74 | 20 6f 66 20 6d 6f 6c 65 |ive list| of mole|
|00000440| 63 75 6c 65 73 2c 20 61 | 6e 64 20 69 66 20 61 6e |cules, a|nd if an|
|00000450| 79 20 63 68 61 6e 67 65 | 73 20 77 65 72 65 20 6d |y change|s were m|
|00000460| 61 64 65 20 74 6f 20 69 | 74 2c 20 61 73 6b 73 20 |ade to i|t, asks |
|00000470| 74 68 65 20 75 73 65 72 | 20 69 66 20 74 68 65 20 |the user| if the |
|00000480| 63 68 61 6e 67 65 73 20 | 73 68 6f 75 6c 64 20 62 |changes |should b|
|00000490| 65 20 73 61 76 65 64 2e | 00 00 00 00 ae 53 61 76 |e saved.|.....Sav|
|000004a0| 65 73 20 74 68 65 20 6d | 6f 6c 65 63 75 6c 65 20 |es the m|olecule |
|000004b0| 61 6e 64 20 69 74 d5 73 | 20 63 6f 6e 66 69 67 75 |and it.s| configu|
|000004c0| 72 61 74 69 6f 6e 20 74 | 6f 20 64 69 73 6b 20 73 |ration t|o disk s|
|000004d0| 6f 20 74 68 61 74 20 69 | 74 20 6d 61 79 20 62 65 |o that i|t may be|
|000004e0| 20 72 65 73 74 6f 72 65 | 64 20 66 72 6f 6d 20 64 | restore|d from d|
|000004f0| 69 73 6b 20 61 74 20 61 | 20 6c 61 74 65 72 20 74 |isk at a| later t|
|00000500| 69 6d 65 2e 20 20 54 68 | 65 20 6d 6f 6c 65 63 75 |ime. Th|e molecu|
|00000510| 6c 65 20 77 69 6c 6c 20 | 62 65 20 73 61 76 65 64 |le will |be saved|
|00000520| 20 69 6e 20 74 68 65 20 | 66 69 6c 65 20 69 6e 74 | in the |file int|
|00000530| 6f 20 77 68 69 63 68 20 | 69 74 20 77 61 73 20 6c |o which |it was l|
|00000540| 61 73 74 20 73 61 76 65 | 64 2e 00 00 00 00 3d 53 |ast save|d.....=S|
|00000550| 61 76 65 73 20 74 68 65 | 20 6d 6f 6c 65 63 75 6c |aves the| molecul|
|00000560| 65 20 74 6f 20 61 20 66 | 69 6c 65 20 77 68 69 63 |e to a f|ile whic|
|00000570| 68 20 69 73 20 73 70 65 | 63 69 66 69 65 64 20 62 |h is spe|cified b|
|00000580| 79 20 74 68 65 20 75 73 | 65 72 2e 00 00 00 00 40 |y the us|er.....@|
|00000590| 43 68 61 6e 67 65 73 20 | 74 68 65 20 63 75 72 72 |Changes |the curr|
|000005a0| 65 6e 74 20 6d 6f 6c 65 | 63 75 6c 65 20 74 6f 20 |ent mole|cule to |
|000005b0| 74 68 65 20 76 65 72 73 | 69 6f 6e 20 6c 61 73 74 |the vers|ion last|
|000005c0| 20 73 61 76 65 64 20 74 | 6f 20 64 69 73 6b 2e 00 | saved t|o disk..|
|000005d0| 00 00 00 cb 57 68 65 6e | 20 70 61 72 74 20 28 6f |....When| part (o|
|000005e0| 72 20 61 6c 6c 29 20 6f | 66 20 74 68 65 20 6d 6f |r all) o|f the mo|
|000005f0| 6c 65 63 75 6c 65 20 69 | 73 20 73 65 6c 65 63 74 |lecule i|s select|
|00000600| 65 64 2c 20 43 75 74 20 | 63 6f 70 69 65 73 20 74 |ed, Cut |copies t|
|00000610| 68 61 74 20 70 61 72 74 | 20 74 6f 20 74 68 65 20 |hat part| to the |
|00000620| 63 6c 69 70 62 6f 61 72 | 64 20 61 6e 64 20 74 68 |clipboar|d and th|
|00000630| 65 6e 20 72 65 6d 6f 76 | 65 73 20 69 74 20 66 72 |en remov|es it fr|
|00000640| 6f 6d 20 74 68 65 20 6d | 6f 6c 65 63 75 6c 65 2e |om the m|olecule.|
|00000650| 20 20 49 74 20 63 61 6e | 20 6c 61 74 65 72 20 62 | It can| later b|
|00000660| 65 20 70 61 73 74 65 64 | 20 62 61 63 6b 20 73 6f |e pasted| back so|
|00000670| 6d 65 77 68 65 72 65 20 | 65 6c 73 65 2e 20 20 0d |mewhere |else. .|
|00000680| 53 65 65 20 43 6f 70 79 | 20 66 6f 72 20 6d 6f 72 |See Copy| for mor|
|00000690| 65 20 69 6e 66 6f 72 6d | 61 74 69 6f 6e 2e 00 00 |e inform|ation...|
|000006a0| 00 00 57 54 68 69 73 20 | 69 74 65 6d 20 61 6c 6c |..WThis |item all|
|000006b0| 6f 77 73 20 79 6f 75 20 | 74 6f 20 75 6e 64 6f 20 |ows you |to undo |
|000006c0| 74 68 65 20 6c 61 73 74 | 20 61 63 74 69 6f 6e 20 |the last| action |
|000006d0| 70 65 72 66 6f 72 6d 65 | 64 2e 20 20 4d 6f 73 74 |performe|d. Most|
|000006e0| 20 6f 70 74 69 6f 6e 73 | 20 61 72 65 20 d2 75 6e | options| are .un|
|000006f0| 64 6f 2d 61 62 6c 65 2e | d3 00 00 00 00 82 54 68 |do-able.|......Th|
|00000700| 69 73 20 6f 70 74 69 6f | 6e 20 61 6c 6c 6f 77 73 |is optio|n allows|
|00000710| 20 79 6f 75 20 74 6f 20 | 71 75 69 74 20 74 68 65 | you to |quit the|
|00000720| 20 70 72 6f 67 72 61 6d | 2e 20 20 49 74 20 61 73 | program|. It as|
|00000730| 6b 73 20 69 66 20 79 6f | 75 20 77 69 73 68 20 74 |ks if yo|u wish t|
|00000740| 6f 20 73 61 76 65 20 61 | 6e 79 20 6d 6f 6c 65 63 |o save a|ny molec|
|00000750| 75 6c 65 73 20 74 68 61 | 74 20 79 6f 75 20 68 61 |ules tha|t you ha|
|00000760| 76 65 20 63 68 61 6e 67 | 65 64 20 6f 72 20 68 61 |ve chang|ed or ha|
|00000770| 76 65 20 79 65 74 20 74 | 6f 20 73 61 76 65 2e 00 |ve yet t|o save..|
|00000780| 00 00 00 4b 54 68 69 73 | 20 69 73 20 61 20 73 74 |...KThis| is a st|
|00000790| 61 6e 64 61 72 64 20 70 | 72 69 6e 74 69 6e 67 20 |andard p|rinting |
|000007a0| 6f 70 74 69 6f 6e 2c 20 | 61 6c 6c 6f 77 69 6e 67 |option, |allowing|
|000007b0| 20 79 6f 75 20 74 6f 20 | 63 6f 6e 66 69 67 75 72 | you to |configur|
|000007c0| 65 20 74 68 65 20 70 72 | 69 6e 74 65 72 2e 00 00 |e the pr|inter...|
|000007d0| 00 00 27 54 68 69 73 20 | 69 74 65 6d 20 73 65 6c |..'This |item sel|
|000007e0| 65 63 74 73 20 74 68 65 | 20 65 6e 74 69 72 65 20 |ects the| entire |
|000007f0| 6d 6f 6c 65 63 75 6c 65 | 2e 00 00 00 00 76 43 6c |molecule|.....vCl|
|00000800| 65 61 72 20 72 65 6d 6f | 76 65 73 20 77 68 61 74 |ear remo|ves what|
|00000810| 65 76 65 72 20 69 73 20 | 73 65 6c 65 63 74 65 64 |ever is |selected|
|00000820| 20 77 69 74 68 6f 75 74 | 20 73 61 76 69 6e 67 20 | without| saving |
|00000830| 69 74 20 74 6f 20 74 68 | 65 20 63 6c 69 70 62 6f |it to th|e clipbo|
|00000840| 61 72 64 2e 20 20 54 68 | 65 20 27 62 61 63 6b 73 |ard. Th|e 'backs|
|00000850| 70 61 63 65 27 20 6b 65 | 79 20 64 75 70 6c 69 63 |pace' ke|y duplic|
|00000860| 61 74 65 73 20 74 68 69 | 73 20 66 75 6e 63 74 69 |ates thi|s functi|
|00000870| 6f 6e 2e 00 00 00 06 4c | 48 65 72 65 20 79 6f 75 |on.....L|Here you|
|00000880| 20 6d 61 79 20 65 69 74 | 68 65 72 20 63 68 61 6e | may eit|her chan|
|00000890| 67 65 20 74 68 65 20 63 | 6f 6f 72 64 69 6e 61 74 |ge the c|oordinat|
|000008a0| 65 73 20 6f 66 20 74 68 | 65 20 61 74 6f 6d 73 20 |es of th|e atoms |
|000008b0| 6f 72 20 74 68 65 20 61 | 74 6f 6d 73 20 74 68 65 |or the a|toms the|
|000008c0| 6d 73 65 6c 76 65 73 2e | 20 20 59 6f 75 20 6d 61 |mselves.| You ma|
|000008d0| 79 20 61 6c 73 6f 20 61 | 64 64 20 6e 65 77 20 61 |y also a|dd new a|
|000008e0| 74 6f 6d 73 2e 20 20 0d | 57 68 65 6e 20 73 65 6c |toms. .|When sel|
|000008f0| 65 63 74 65 64 2c 20 75 | 70 20 70 6f 70 73 20 61 |ected, u|p pops a|
|00000900| 6e 20 27 45 64 69 74 20 | 54 61 62 6c 65 27 20 69 |n 'Edit |Table' i|
|00000910| 6e 20 77 68 65 72 65 20 | 79 6f 75 20 6d 61 79 20 |n where |you may |
|00000920| 65 64 69 74 20 65 61 63 | 68 20 63 65 6c 6c 2e 20 |edit eac|h cell. |
|00000930| 20 54 68 65 20 66 69 72 | 73 74 20 63 6f 6c 75 6d | The fir|st colum|
|00000940| 6e 20 69 73 20 74 68 65 | 20 61 74 6f 6d 20 74 79 |n is the| atom ty|
|00000950| 70 65 2c 20 73 70 65 63 | 69 66 69 65 64 20 62 79 |pe, spec|ified by|
|00000960| 20 69 74 73 20 61 74 6f | 6d 69 63 20 73 79 6d 62 | its ato|mic symb|
|00000970| 6f 6c 20 28 77 68 69 63 | 68 20 69 73 20 63 61 73 |ol (whic|h is cas|
|00000980| 65 20 73 65 6e 73 69 74 | 69 76 65 29 2e 20 20 54 |e sensit|ive). T|
|00000990| 68 65 20 6e 65 78 74 20 | 74 68 72 65 65 20 63 6f |he next |three co|
|000009a0| 6c 75 6d 6e 73 20 61 72 | 65 20 74 68 65 20 58 2c |lumns ar|e the X,|
|000009b0| 20 59 20 61 6e 64 20 5a | 20 63 6f 6f 72 64 69 6e | Y and Z| coordin|
|000009c0| 61 74 65 73 20 6f 66 20 | 74 68 65 20 61 74 6f 6d |ates of |the atom|
|000009d0| 2e 20 20 41 6c 6c 20 74 | 68 72 65 65 20 76 61 6c |. All t|hree val|
|000009e0| 75 65 73 20 6d 75 73 74 | 20 62 65 20 65 6e 74 65 |ues must| be ente|
|000009f0| 72 65 64 20 66 6f 72 20 | 65 61 63 68 20 63 6f 72 |red for |each cor|
|00000a00| 72 65 73 70 6f 6e 64 69 | 6e 67 20 61 74 6f 6d 20 |respondi|ng atom |
|00000a10| 69 6e 20 65 61 63 68 20 | 72 6f 77 2e 0d 0d 53 70 |in each |row...Sp|
|00000a20| 65 63 69 61 6c 20 4b 65 | 79 73 3a 0d 54 61 62 20 |ecial Ke|ys:.Tab |
|00000a30| 61 64 76 61 6e 63 65 73 | 20 74 68 65 20 61 63 74 |advances| the act|
|00000a40| 69 76 65 20 63 65 6c 6c | 20 74 6f 20 74 68 65 20 |ive cell| to the |
|00000a50| 72 69 67 68 74 2c 20 53 | 68 69 66 74 2d 54 61 62 |right, S|hift-Tab|
|00000a60| 20 74 6f 20 74 68 65 20 | 6c 65 66 74 2c 20 52 65 | to the |left, Re|
|00000a70| 74 75 72 6e 20 64 6f 77 | 6e 2c 20 61 6e 64 20 53 |turn dow|n, and S|
|00000a80| 68 69 66 74 2d 52 65 74 | 75 72 6e 20 75 70 20 6f |hift-Ret|urn up o|
|00000a90| 6e 65 20 63 65 6c 6c 2e | 20 20 45 6e 74 65 72 20 |ne cell.| Enter |
|00000aa0| 77 69 6c 6c 20 65 6e 74 | 65 72 20 74 68 65 20 76 |will ent|er the v|
|00000ab0| 61 6c 75 65 20 69 6e 20 | 74 68 65 20 61 63 74 69 |alue in |the acti|
|00000ac0| 76 65 20 63 65 6c 6c 2e | 20 20 57 68 65 6e 20 70 |ve cell.| When p|
|00000ad0| 61 72 74 20 6f 66 20 6d | 6f 6c 65 63 75 6c 65 20 |art of m|olecule |
|00000ae0| 69 73 20 73 65 6c 65 63 | 74 65 64 2c 20 70 72 65 |is selec|ted, pre|
|00000af0| 73 73 69 6e 67 20 45 6e | 74 65 72 20 77 69 6c 6c |ssing En|ter will|
|00000b00| 20 70 6c 61 63 65 20 74 | 68 65 20 61 63 74 69 76 | place t|he activ|
|00000b10| 65 20 63 65 6c 6c 20 6f | 6e 20 74 68 65 20 72 6f |e cell o|n the ro|
|00000b20| 77 20 6f 66 20 65 61 63 | 68 20 61 74 6f 6d 20 69 |w of eac|h atom i|
|00000b30| 6e 20 74 68 65 20 73 65 | 6c 65 63 74 65 64 20 70 |n the se|lected p|
|00000b40| 6f 72 74 69 6f 6e 20 6f | 66 20 74 68 65 20 6d 6f |ortion o|f the mo|
|00000b50| 6c 65 63 75 6c 65 2c 20 | 6f 6e 65 20 72 6f 77 20 |lecule, |one row |
|00000b60| 61 74 20 61 20 74 69 6d | 65 2e 20 0d 0d 42 75 74 |at a tim|e. ..But|
|00000b70| 74 6f 6e 73 3a 0d 54 72 | 61 6e 73 66 6f 72 6d 20 |tons:.Tr|ansform |
|00000b80| 2d 20 4d 6f 64 69 66 69 | 65 73 20 74 68 65 20 63 |- Modifi|es the c|
|00000b90| 6f 6f 72 64 69 6e 61 74 | 65 73 20 62 79 20 74 68 |oordinat|es by th|
|00000ba0| 65 20 63 75 72 72 65 6e | 74 20 74 72 61 6e 73 66 |e curren|t transf|
|00000bb0| 6f 72 6d 61 74 69 6f 6e | 20 61 70 70 6c 69 65 64 |ormation| applied|
|00000bc0| 20 6f 6e 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 | on the |molecule|
|00000bd0| 2e 20 20 50 72 65 73 73 | 69 6e 67 20 74 68 69 73 |. Press|ing this|
|00000be0| 20 62 75 74 74 6f 6e 20 | 6f 6e 63 65 20 77 69 6c | button |once wil|
|00000bf0| 6c 20 70 6c 61 63 65 20 | 74 68 65 20 63 75 72 72 |l place |the curr|
|00000c00| 65 6e 74 20 63 6f 6f 72 | 64 69 6e 61 74 65 73 20 |ent coor|dinates |
|00000c10| 69 6e 20 74 68 65 20 74 | 61 62 6c 65 2c 20 61 6e |in the t|able, an|
|00000c20| 64 20 70 72 65 73 73 69 | 6e 67 20 69 74 20 61 67 |d pressi|ng it ag|
|00000c30| 61 69 6e 20 77 69 6c 6c | 20 67 69 76 65 20 63 6f |ain will| give co|
|00000c40| 6f 72 64 69 6e 61 74 65 | 73 20 74 68 61 74 20 68 |ordinate|s that h|
|00000c50| 61 76 65 20 62 65 65 6e | 20 74 72 61 6e 73 66 6f |ave been| transfo|
|00000c60| 72 6d 65 64 20 74 77 69 | 63 65 20 62 79 20 74 68 |rmed twi|ce by th|
|00000c70| 65 20 63 75 72 72 65 6e | 74 20 73 65 74 74 69 6e |e curren|t settin|
|00000c80| 67 73 2c 20 65 74 63 2e | 0d 4f 72 69 67 69 6e 61 |gs, etc.|.Origina|
|00000c90| 6c 20 2d 20 50 6c 61 63 | 65 73 20 74 68 65 20 6f |l - Plac|es the o|
|00000ca0| 72 69 67 69 6e 61 6c 20 | 63 6f 6f 72 64 69 6e 61 |riginal |coordina|
|00000cb0| 74 65 73 20 69 6e 74 6f | 20 74 68 65 20 74 61 62 |tes into| the tab|
|00000cc0| 6c 65 2c 20 77 69 74 68 | 6f 75 74 20 6d 6f 64 69 |le, with|out modi|
|00000cd0| 66 79 69 6e 67 20 74 68 | 65 6d 20 62 79 20 74 68 |fying th|em by th|
|00000ce0| 65 20 63 75 72 72 65 6e | 74 20 74 72 61 6e 73 66 |e curren|t transf|
|00000cf0| 6f 72 6d 61 74 69 6f 6e | 73 2e 0d 4f 4b 20 2d 20 |ormation|s..OK - |
|00000d00| 53 61 76 65 73 20 74 68 | 65 20 63 6f 6f 72 64 69 |Saves th|e coordi|
|00000d10| 6e 61 74 65 73 20 65 6e | 74 65 72 65 64 20 69 6e |nates en|tered in|
|00000d20| 20 74 68 65 20 74 61 62 | 6c 65 20 74 6f 20 74 68 | the tab|le to th|
|00000d30| 65 20 63 75 72 72 65 6e | 74 20 6d 6f 6c 65 63 75 |e curren|t molecu|
|00000d40| 6c 65 2e 20 20 43 6f 6f | 72 64 69 6e 61 74 65 73 |le. Coo|rdinates|
|00000d50| 20 61 72 65 20 72 65 61 | 64 20 75 6e 74 69 6c 20 | are rea|d until |
|00000d60| 61 6e 20 61 74 6f 6d 20 | 77 69 74 68 20 61 6e 20 |an atom |with an |
|00000d70| 69 6e 63 6f 72 72 65 63 | 74 20 73 79 6d 62 6f 6c |incorrec|t symbol|
|00000d80| 20 6f 72 20 6e 6f 74 68 | 69 6e 67 20 61 74 20 61 | or noth|ing at a|
|00000d90| 6c 6c 20 69 73 20 69 6e | 20 74 68 65 20 66 69 72 |ll is in| the fir|
|00000da0| 73 74 20 63 6f 6c 75 6d | 6e 2e 20 20 54 68 65 20 |st colum|n. The |
|00000db0| 63 6f 6f 72 64 69 6e 61 | 74 65 73 20 77 69 6c 6c |coordina|tes will|
|00000dc0| 20 62 65 20 6d 6f 64 69 | 66 69 65 64 20 62 79 20 | be modi|fied by |
|00000dd0| 74 68 65 20 63 75 72 72 | 65 6e 74 20 74 72 61 6e |the curr|ent tran|
|00000de0| 73 66 6f 72 6d 61 74 69 | 6f 6e 73 20 69 66 20 74 |sformati|ons if t|
|00000df0| 68 65 20 74 72 61 6e 73 | 66 6f 72 6d 20 62 75 74 |he trans|form but|
|00000e00| 74 6f 6e 20 77 61 73 20 | 6e 6f 74 20 74 68 65 20 |ton was |not the |
|00000e10| 6c 61 73 74 20 70 72 65 | 73 73 65 64 2e 20 20 4f |last pre|ssed. O|
|00000e20| 74 68 65 72 77 69 73 65 | 20 74 68 65 20 63 6f 6f |therwise| the coo|
|00000e30| 72 64 69 6e 61 74 65 73 | 20 77 69 6c 6c 20 62 65 |rdinates| will be|
|00000e40| 63 6f 6d 65 20 74 68 65 | 20 4f 72 69 67 69 6e 61 |come the| Origina|
|00000e50| 6c 20 63 6f 6f 72 64 69 | 6e 61 74 65 73 20 61 6e |l coordi|nates an|
|00000e60| 64 20 74 68 65 20 73 65 | 74 74 69 6e 67 73 20 77 |d the se|ttings w|
|00000e70| 69 6c 6c 20 62 65 20 53 | 65 74 20 54 6f 20 49 64 |ill be S|et To Id|
|00000e80| 65 6e 74 69 74 79 2e 0d | 43 61 6e 63 65 6c 20 2d |entity..|Cancel -|
|00000e90| 20 4e 6f 6e 65 20 6f 66 | 20 74 68 65 20 63 68 61 | None of| the cha|
|00000ea0| 6e 67 65 73 20 61 72 65 | 20 65 6e 74 65 72 65 64 |nges are| entered|
|00000eb0| 20 69 6e 74 6f 20 74 68 | 65 20 6d 6f 6c 65 63 75 | into th|e molecu|
|00000ec0| 6c 65 2e 00 00 00 00 aa | 54 68 69 73 20 63 68 61 |le......|This cha|
|00000ed0| 6e 67 65 73 20 74 68 65 | 20 77 61 79 20 74 68 65 |nges the| way the|
|00000ee0| 20 6d 6f 6c 65 63 75 6c | 65 20 69 73 20 64 72 61 | molecul|e is dra|
|00000ef0| 77 6e 20 69 6e 20 74 68 | 65 20 63 75 72 72 65 6e |wn in th|e curren|
|00000f00| 74 20 57 6f 72 6b 73 68 | 65 65 74 2e 20 20 20 59 |t Worksh|eet. Y|
|00000f10| 6f 75 20 6d 61 79 20 63 | 68 6f 6f 73 65 20 74 6f |ou may c|hoose to|
|00000f20| 20 64 72 61 77 20 6a 75 | 73 74 20 74 68 65 20 61 | draw ju|st the a|
|00000f30| 74 6f 6d 73 2c 20 6f 72 | 20 6a 75 73 74 20 74 68 |toms, or| just th|
|00000f40| 65 20 62 6f 6e 64 73 2c | 20 6f 72 20 64 72 61 77 |e bonds,| or draw|
|00000f50| 20 73 68 61 64 65 64 20 | 61 74 6f 6d 73 20 6f 72 | shaded |atoms or|
|00000f60| 20 77 69 72 65 66 72 61 | 6d 65 20 62 6f 6e 64 73 | wirefra|me bonds|
|00000f70| 2e 00 00 00 00 9a 54 68 | 69 73 20 61 6c 6c 6f 77 |......Th|is allow|
|00000f80| 73 20 74 68 65 20 63 6c | 69 70 62 6f 61 72 64 20 |s the cl|ipboard |
|00000f90| 74 6f 20 61 70 70 65 61 | 72 20 6f 6e 20 74 68 65 |to appea|r on the|
|00000fa0| 20 73 63 72 65 65 6e 2e | 20 20 54 68 65 20 63 6c | screen.| The cl|
|00000fb0| 69 70 62 6f 61 72 64 20 | 77 69 6e 64 6f 77 20 64 |ipboard |window d|
|00000fc0| 69 73 70 6c 61 79 73 20 | 77 68 61 74 65 76 65 72 |isplays |whatever|
|00000fd0| 20 69 73 20 63 75 72 72 | 65 6e 74 6c 79 20 69 6e | is curr|ently in|
|00000fe0| 20 74 68 65 20 63 6c 69 | 70 62 6f 61 72 64 2e 20 | the cli|pboard. |
|00000ff0| 20 49 74 20 6d 61 79 20 | 73 68 6f 77 20 74 65 78 | It may |show tex|
|00001000| 74 20 6f 72 20 61 20 70 | 69 63 74 75 72 65 2e 00 |t or a p|icture..|
|00001010| 00 00 00 8e 57 68 65 6e | 20 74 77 6f 20 62 6f 6e |....When| two bon|
|00001020| 64 73 20 61 72 65 20 73 | 65 6c 65 63 74 65 64 20 |ds are s|elected |
|00001030| 77 69 74 68 20 61 20 63 | 6f 6d 6d 6f 6e 20 76 65 |with a c|ommon ve|
|00001040| 72 74 65 78 20 61 6e 64 | 20 74 68 69 73 20 69 74 |rtex and| this it|
|00001050| 65 6d 20 69 73 20 63 68 | 6f 73 65 6e 2c 20 74 68 |em is ch|osen, th|
|00001060| 65 20 61 6e 67 6c 65 20 | 62 65 74 77 65 65 6e 20 |e angle |between |
|00001070| 74 68 65 20 74 77 6f 20 | 62 6f 6e 64 73 20 69 73 |the two |bonds is|
|00001080| 20 64 69 73 70 6c 61 79 | 65 64 20 69 6e 20 74 68 | display|ed in th|
|00001090| 65 20 6d 65 73 73 61 67 | 65 20 77 69 6e 64 6f 77 |e messag|e window|
|000010a0| 2e 00 00 00 00 eb 48 65 | 72 65 20 79 6f 75 20 6d |......He|re you m|
|000010b0| 61 79 20 63 68 6f 6f 73 | 65 20 74 68 65 20 61 78 |ay choos|e the ax|
|000010c0| 65 73 20 6f 66 20 72 6f | 74 61 74 69 6f 6e 20 61 |es of ro|tation a|
|000010d0| 6e 64 20 74 68 65 20 74 | 79 70 65 20 6f 66 20 72 |nd the t|ype of r|
|000010e0| 6f 74 61 74 69 6f 6e 2e | 20 20 59 6f 75 20 6d 61 |otation.| You ma|
|000010f0| 79 20 61 6c 73 6f 20 63 | 68 61 6e 67 65 20 74 68 |y also c|hange th|
|00001100| 65 20 69 6e 63 72 65 6d | 65 6e 74 20 6f 66 20 72 |e increm|ent of r|
|00001110| 6f 74 61 74 69 6f 6e 2c | 20 67 69 76 65 6e 20 69 |otation,| given i|
|00001120| 6e 20 64 65 67 72 65 65 | 73 2e 20 20 59 6f 75 20 |n degree|s. You |
|00001130| 63 61 6e 20 73 65 6c 65 | 63 74 20 75 70 20 74 6f |can sele|ct up to|
|00001140| 20 74 68 72 65 65 20 61 | 78 65 73 20 28 58 2c 20 | three a|xes (X, |
|00001150| 59 2c 20 61 6e 64 20 5a | 29 20 61 6e 64 20 73 65 |Y, and Z|) and se|
|00001160| 6c 65 63 74 20 65 69 74 | 68 65 72 20 43 6f 6e 74 |lect eit|her Cont|
|00001170| 69 6e 75 6f 75 73 20 6f | 72 20 53 69 6e 67 6c 65 |inuous o|r Single|
|00001180| 20 53 74 65 70 20 72 6f | 74 61 74 69 6f 6e 2e 20 | Step ro|tation. |
|00001190| 00 00 00 00 40 53 6c 6f | 77 20 64 69 73 70 6c 61 |....@Slo|w displa|
|000011a0| 79 73 20 74 68 65 20 66 | 72 61 6d 65 73 20 77 69 |ys the f|rames wi|
|000011b0| 74 68 20 61 20 73 65 63 | 6f 6e 64 20 77 61 69 74 |th a sec|ond wait|
|000011c0| 20 62 65 74 77 65 65 6e | 20 65 61 63 68 20 66 72 | between| each fr|
|000011d0| 61 6d 65 2e 00 00 00 01 | 55 57 68 65 6e 20 53 61 |ame.....|UWhen Sa|
|000011e0| 76 65 20 49 6d 61 67 65 | 20 69 73 20 63 68 65 63 |ve Image| is chec|
|000011f0| 6b 65 64 2c 20 61 6e 20 | 69 6d 61 67 65 20 6f 66 |ked, an |image of|
|00001200| 20 74 68 65 20 6d 6f 6c | 65 63 75 6c 65 20 77 69 | the mol|ecule wi|
|00001210| 6c 6c 20 62 65 20 73 61 | 76 65 64 20 69 6e 20 52 |ll be sa|ved in R|
|00001220| 41 4d 20 66 6f 72 20 6d | 6f 72 65 20 72 61 70 69 |AM for m|ore rapi|
|00001230| 64 20 64 69 73 70 6c 61 | 79 69 6e 67 20 6f 66 20 |d displa|ying of |
|00001240| 74 68 65 20 66 72 61 6d | 65 73 2e 20 20 54 68 65 |the fram|es. The|
|00001250| 20 6d 6f 6c 65 63 75 6c | 65 73 20 61 72 65 20 6f | molecul|es are o|
|00001260| 6e 6c 79 20 64 72 61 77 | 6e 20 6f 6e 63 65 2e 20 |nly draw|n once. |
|00001270| 20 57 68 65 6e 20 74 68 | 69 73 20 69 74 65 6d 20 | When th|is item |
|00001280| 69 73 20 6e 6f 74 20 63 | 68 65 63 6b 65 64 2c 20 |is not c|hecked, |
|00001290| 74 68 65 20 6d 6f 6c 65 | 63 75 6c 65 73 20 61 72 |the mole|cules ar|
|000012a0| 65 20 63 6f 6d 70 75 74 | 65 64 20 65 76 65 72 79 |e comput|ed every|
|000012b0| 20 74 69 6d 65 20 74 68 | 65 79 20 61 72 65 20 64 | time th|ey are d|
|000012c0| 69 73 70 6c 61 79 65 64 | 2e 20 4f 6e 20 61 20 35 |isplayed|. On a 5|
|000012d0| 31 32 4b 20 4d 61 63 20 | 61 62 6f 75 74 20 74 77 |12K Mac |about tw|
|000012e0| 65 6e 74 79 20 66 72 61 | 6d 65 73 20 63 61 6e 20 |enty fra|mes can |
|000012f0| 62 65 20 73 61 76 65 64 | 20 61 6e 64 20 70 6c 61 |be saved| and pla|
|00001300| 79 65 64 20 69 6e 20 72 | 61 70 69 64 20 73 65 71 |yed in r|apid seq|
|00001310| 75 65 6e 63 65 20 66 6f | 72 20 61 6e 69 6d 61 74 |uence fo|r animat|
|00001320| 65 64 20 64 69 73 70 6c | 61 79 73 2e 20 00 00 00 |ed displ|ays. ...|
|00001330| 00 47 4d 65 64 69 75 6d | 20 64 69 73 70 6c 61 79 |.GMedium| display|
|00001340| 73 20 74 68 65 20 66 72 | 61 6d 65 73 20 77 69 74 |s the fr|ames wit|
|00001350| 68 20 61 20 68 61 6c 66 | 20 73 65 63 6f 6e 64 20 |h a half| second |
|00001360| 77 61 69 74 20 62 65 74 | 77 65 65 6e 20 65 61 63 |wait bet|ween eac|
|00001370| 68 20 66 72 61 6d 65 2e | 00 00 00 00 58 57 68 65 |h frame.|....XWhe|
|00001380| 6e 20 42 61 63 6b 77 61 | 72 64 73 20 69 73 20 73 |n Backwa|rds is s|
|00001390| 65 6c 65 63 74 65 64 2c | 20 74 68 65 20 66 72 61 |elected,| the fra|
|000013a0| 6d 65 73 20 77 69 6c 6c | 20 6d 6f 76 65 20 69 6e |mes will| move in|
|000013b0| 20 61 20 62 61 63 6b 77 | 61 72 64 20 64 69 72 65 | a backw|ard dire|
|000013c0| 63 74 69 6f 6e 20 28 74 | 6f 20 74 68 65 20 6c 65 |ction (t|o the le|
|000013d0| 66 74 29 2e 00 00 00 00 | 57 57 68 65 6e 20 46 6f |ft).....|WWhen Fo|
|000013e0| 72 77 61 72 64 73 20 69 | 73 20 73 65 6c 65 63 74 |rwards i|s select|
|000013f0| 65 64 2c 20 74 68 65 20 | 66 72 61 6d 65 73 20 77 |ed, the |frames w|
|00001400| 69 6c 6c 20 6d 6f 76 65 | 20 69 6e 20 61 20 66 6f |ill move| in a fo|
|00001410| 72 77 61 72 64 20 64 69 | 72 65 63 74 69 6f 6e 20 |rward di|rection |
|00001420| 28 74 6f 20 74 68 65 20 | 72 69 67 68 74 29 2e 00 |(to the |right)..|
|00001430| 00 00 00 53 57 68 65 6e | 20 52 6f 63 6b 69 6e 67 |...SWhen| Rocking|
|00001440| 20 69 73 20 73 65 6c 65 | 63 74 65 64 2c 20 74 68 | is sele|cted, th|
|00001450| 65 20 66 72 61 6d 65 73 | 20 77 69 6c 6c 20 6d 6f |e frames| will mo|
|00001460| 76 65 20 61 6c 74 65 72 | 6e 61 74 65 6c 79 20 66 |ve alter|nately f|
|00001470| 6f 72 77 61 72 64 73 20 | 61 6e 64 20 62 61 63 6b |orwards |and back|
|00001480| 77 61 72 64 73 2e 00 00 | 00 02 6b 59 6f 75 20 6d |wards...|..kYou m|
|00001490| 61 79 20 72 6f 74 61 74 | 65 20 74 68 65 20 6d 6f |ay rotat|e the mo|
|000014a0| 6c 65 63 75 6c 65 20 61 | 6c 6f 6e 67 20 61 6e 79 |lecule a|long any|
|000014b0| 20 6f 66 20 74 68 65 20 | 74 68 72 65 65 20 6f 74 | of the |three ot|
|000014c0| 68 6f 67 6f 6e 61 6c 20 | 61 78 65 73 20 77 69 74 |hogonal |axes wit|
|000014d0| 68 20 74 68 69 73 20 6f | 70 74 69 6f 6e 2e 20 20 |h this o|ption. |
|000014e0| 54 68 69 73 20 77 69 6c | 6c 20 72 6f 74 61 74 65 |This wil|l rotate|
|000014f0| 20 74 68 65 20 6d 6f 6c | 65 63 75 6c 65 20 62 79 | the mol|ecule by|
|00001500| 20 74 68 65 20 63 75 72 | 72 65 6e 74 20 52 6f 74 | the cur|rent Rot|
|00001510| 61 74 65 20 53 65 74 74 | 69 6e 67 73 2e 20 20 49 |ate Sett|ings. I|
|00001520| 66 20 74 68 69 73 20 69 | 73 20 74 68 65 20 66 69 |f this i|s the fi|
|00001530| 72 73 74 20 74 69 6d 65 | 20 74 68 61 74 20 69 74 |rst time| that it|
|00001540| 20 69 73 20 73 65 6c 65 | 63 74 65 64 2c 20 74 68 | is sele|cted, th|
|00001550| 65 6e 20 52 6f 74 61 74 | 65 20 53 65 74 74 69 6e |en Rotat|e Settin|
|00001560| 67 73 20 61 70 70 65 61 | 72 73 20 73 6f 20 74 68 |gs appea|rs so th|
|00001570| 61 74 20 79 6f 75 20 6d | 61 79 20 63 68 6f 6f 73 |at you m|ay choos|
|00001580| 65 20 68 6f 77 20 79 6f | 75 20 77 69 73 68 20 74 |e how yo|u wish t|
|00001590| 6f 20 72 6f 74 61 74 65 | 20 74 68 65 20 6d 6f 6c |o rotate| the mol|
|000015a0| 65 63 75 6c 65 2e 0d 0d | 54 68 69 73 20 69 74 65 |ecule...|This ite|
|000015b0| 6d 20 74 6f 67 67 6c 65 | 73 20 62 65 74 77 65 65 |m toggle|s betwee|
|000015c0| 6e 20 52 6f 74 61 74 69 | 6f 6e 20 61 6e 64 20 48 |n Rotati|on and H|
|000015d0| 61 6c 74 20 52 6f 74 61 | 74 69 6f 6e 2e 20 20 44 |alt Rota|tion. D|
|000015e0| 75 72 69 6e 67 20 72 6f | 74 61 74 69 6f 6e 2c 20 |uring ro|tation, |
|000015f0| 6e 6f 74 68 69 6e 67 20 | 65 6c 73 65 20 63 61 6e |nothing |else can|
|00001600| 20 6f 63 63 75 72 20 75 | 6e 74 69 6c 20 48 61 6c | occur u|ntil Hal|
|00001610| 74 20 52 6f 74 61 74 69 | 6f 6e 20 69 73 20 73 65 |t Rotati|on is se|
|00001620| 6c 65 63 74 65 64 2e 0d | 0d 49 66 20 70 61 72 74 |lected..|.If part|
|00001630| 20 6f 66 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 | of the |molecule|
|00001640| 20 69 73 20 73 65 6c 65 | 63 74 65 64 20 77 68 65 | is sele|cted whe|
|00001650| 6e 20 63 68 6f 6f 73 69 | 6e 67 20 74 68 69 73 20 |n choosi|ng this |
|00001660| 6f 70 74 69 6f 6e 2c 20 | 6f 6e 6c 79 20 74 68 61 |option, |only tha|
|00001670| 74 20 70 61 72 74 20 77 | 69 6c 6c 20 72 6f 74 61 |t part w|ill rota|
|00001680| 74 65 20 61 6e 64 20 74 | 68 65 20 72 65 73 74 20 |te and t|he rest |
|00001690| 6f 66 20 74 68 65 20 6d | 6f 6c 65 63 75 6c 65 20 |of the m|olecule |
|000016a0| 77 69 6c 6c 20 73 74 61 | 79 20 67 6c 75 65 64 20 |will sta|y glued |
|000016b0| 74 6f 20 69 74 d5 73 20 | 63 75 72 72 65 6e 74 20 |to it.s |current |
|000016c0| 70 6f 73 69 74 69 6f 6e | 2e 20 20 54 68 69 73 20 |position|. This |
|000016d0| 6f 70 74 69 6f 6e 20 73 | 65 74 73 20 74 68 65 20 |option s|ets the |
|000016e0| 6d 6f 6c 65 63 75 6c 65 | 20 74 6f 20 49 64 65 6e |molecule| to Iden|
|000016f0| 74 69 74 79 2e 00 00 00 | 02 5c 4d 6f 6c 65 63 75 |tity....|.\Molecu|
|00001700| 6c 65 73 20 63 61 6e 20 | 62 65 20 76 69 65 77 65 |les can |be viewe|
|00001710| 64 20 69 6e 20 61 20 76 | 61 72 69 65 74 79 20 6f |d in a v|ariety o|
|00001720| 66 20 77 61 79 73 2e 20 | 20 54 68 65 73 65 20 61 |f ways. | These a|
|00001730| 72 65 20 63 6f 6e 74 72 | 6f 6c 6c 65 64 20 62 79 |re contr|olled by|
|00001740| 20 74 68 65 20 69 74 65 | 6d 73 20 69 6e 20 74 68 | the ite|ms in th|
|00001750| 65 20 44 72 61 77 20 4d | 65 6e 75 2e 20 20 4e 6f |e Draw M|enu. No|
|00001760| 6e 65 20 6f 66 20 74 68 | 65 20 69 74 65 6d 73 20 |ne of th|e items |
|00001770| 61 66 66 65 63 74 73 20 | 74 68 65 20 63 6f 6f 72 |affects |the coor|
|00001780| 64 69 6e 61 74 65 73 20 | 6f 66 20 74 68 65 20 6d |dinates |of the m|
|00001790| 6f 6c 65 63 75 6c 65 3b | 20 20 65 61 63 68 20 6d |olecule;| each m|
|000017a0| 6f 6c 65 63 75 6c 65 20 | 69 73 20 73 61 76 65 64 |olecule |is saved|
|000017b0| 20 77 69 74 68 20 69 74 | d5 73 20 6f 77 6e 20 73 | with it|.s own s|
|000017c0| 65 74 20 6f 66 20 64 72 | 61 77 69 6e 67 20 6f 70 |et of dr|awing op|
|000017d0| 74 69 6f 6e 73 2e 20 20 | 54 68 65 20 73 69 7a 65 |tions. |The size|
|000017e0| 20 6f 66 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 | of the |molecule|
|000017f0| 20 69 73 20 63 6f 6e 74 | 72 6f 6c 6c 65 64 20 62 | is cont|rolled b|
|00001800| 79 20 74 68 65 20 63 6f | 6f 72 64 69 6e 61 74 65 |y the co|ordinate|
|00001810| 20 73 79 73 74 65 6d 20 | 69 6e 20 77 68 69 63 68 | system |in which|
|00001820| 20 69 74 20 69 73 20 64 | 72 61 77 6e 2e 20 20 54 | it is d|rawn. T|
|00001830| 68 65 20 73 69 7a 65 20 | 6f 66 20 74 68 65 20 72 |he size |of the r|
|00001840| 61 64 69 69 20 61 72 65 | 20 73 63 61 6c 65 64 20 |adii are| scaled |
|00001850| 62 79 20 61 20 66 61 63 | 74 6f 72 20 64 65 66 69 |by a fac|tor defi|
|00001860| 6e 65 64 20 62 79 20 74 | 68 65 20 53 63 61 6c 65 |ned by t|he Scale|
|00001870| 20 41 74 6f 6d 20 52 61 | 64 69 75 73 20 6d 65 6e | Atom Ra|dius men|
|00001880| 75 20 69 74 65 6d 2e 20 | 20 54 68 65 20 73 68 61 |u item. | The sha|
|00001890| 64 69 6e 67 20 6f 66 20 | 74 68 65 20 61 74 6f 6d |ding of |the atom|
|000018a0| 73 20 69 73 20 63 6f 6e | 74 72 6f 6c 6c 65 64 20 |s is con|trolled |
|000018b0| 62 79 20 74 68 65 20 53 | 65 74 74 69 6e 67 73 20 |by the S|ettings |
|000018c0| 64 69 61 6c 6f 67 20 62 | 6f 78 2e 20 20 41 6c 73 |dialog b|ox. Als|
|000018d0| 6f 20 63 6f 6e 74 72 6f | 6c 6c 65 64 20 62 79 20 |o contro|lled by |
|000018e0| 74 68 65 20 53 65 74 74 | 69 6e 67 73 20 64 69 61 |the Sett|ings dia|
|000018f0| 6c 6f 67 20 62 6f 78 20 | 61 72 65 20 74 68 65 20 |log box |are the |
|00001900| 77 61 79 20 62 6f 6e 64 | 73 20 61 72 65 20 64 72 |way bond|s are dr|
|00001910| 61 77 6e 20 61 6e 64 20 | 65 78 61 63 74 6c 79 20 |awn and |exactly |
|00001920| 77 68 61 74 20 69 73 20 | 64 72 61 77 6e 2c 20 62 |what is |drawn, b|
|00001930| 65 20 69 74 20 6a 75 73 | 74 20 61 74 6f 6d 73 2c |e it jus|t atoms,|
|00001940| 20 6a 75 73 74 20 62 6f | 6e 64 73 2c 20 6f 72 20 | just bo|nds, or |
|00001950| 62 6f 74 68 2e 00 00 00 | 04 4f 41 20 63 6f 6f 72 |both....|.OA coor|
|00001960| 64 69 6e 61 74 65 20 74 | 61 62 6c 65 20 63 61 6e |dinate t|able can|
|00001970| 20 62 65 20 70 61 73 74 | 65 64 20 69 6e 74 6f 20 | be past|ed into |
|00001980| 74 68 65 20 63 75 72 72 | 65 6e 74 20 6d 6f 6c 65 |the curr|ent mole|
|00001990| 63 75 6c 65 20 65 61 73 | 69 6c 79 2e 20 20 54 68 |cule eas|ily. Th|
|000019a0| 65 20 74 61 62 6c 65 20 | 69 73 20 64 65 66 69 6e |e table |is defin|
|000019b0| 65 64 20 62 79 20 61 20 | 62 75 6e 63 68 20 6f 66 |ed by a |bunch of|
|000019c0| 20 74 65 78 74 2c 20 73 | 65 70 61 72 61 74 65 64 | text, s|eparated|
|000019d0| 20 62 79 20 22 77 68 69 | 74 65 73 70 61 63 65 22 | by "whi|tespace"|
|000019e0| 20 28 62 6c 61 6e 6b 73 | 2c 20 74 61 62 73 2c 20 | (blanks|, tabs, |
|000019f0| 65 6e 74 65 72 20 61 6e | 64 20 72 65 74 75 72 6e |enter an|d return|
|00001a00| 20 63 68 61 72 61 63 74 | 65 72 73 29 2e 20 20 54 | charact|ers). T|
|00001a10| 68 65 20 74 61 62 6c 65 | 20 63 61 6e 20 62 65 20 |he table| can be |
|00001a20| 63 72 65 61 74 65 64 20 | 77 69 74 68 20 61 20 64 |created |with a d|
|00001a30| 65 73 6b 20 61 63 63 65 | 73 73 6f 72 79 20 73 75 |esk acce|ssory su|
|00001a40| 63 68 20 61 73 20 74 68 | 65 20 4e 6f 74 65 20 50 |ch as th|e Note P|
|00001a50| 61 64 2c 20 20 61 6e 20 | 45 64 69 74 6f 72 20 73 |ad, an |Editor s|
|00001a60| 75 63 68 20 61 73 20 45 | 64 69 74 20 6f 72 20 4d |uch as E|dit or M|
|00001a70| 61 63 57 72 69 74 65 2c | 20 6f 72 20 61 6e 79 20 |acWrite,| or any |
|00001a80| 70 72 6f 67 72 61 6d 20 | 74 68 61 74 20 69 73 20 |program |that is |
|00001a90| 63 61 70 61 62 6c 65 20 | 6f 66 20 77 72 69 74 69 |capable |of writi|
|00001aa0| 6e 67 20 74 65 78 74 20 | 74 6f 20 74 68 65 20 43 |ng text |to the C|
|00001ab0| 6c 69 70 62 6f 61 72 64 | 2c 20 73 75 63 68 20 61 |lipboard|, such a|
|00001ac0| 73 20 4d 75 6c 74 69 70 | 6c 61 6e 2e 0d 0d 41 20 |s Multip|lan...A |
|00001ad0| 74 61 62 6c 65 20 69 6e | 20 74 68 65 20 43 6c 69 |table in| the Cli|
|00001ae0| 70 62 6f 61 72 64 20 69 | 73 20 61 20 74 77 6f 20 |pboard i|s a two |
|00001af0| 64 69 6d 65 6e 73 69 6f | 6e 61 6c 20 61 72 72 61 |dimensio|nal arra|
|00001b00| 79 20 6f 66 20 66 6f 75 | 72 20 63 6f 6c 75 6d 6e |y of fou|r column|
|00001b10| 73 20 62 79 20 4e 20 72 | 6f 77 73 2c 20 77 69 74 |s by N r|ows, wit|
|00001b20| 68 20 65 61 63 68 20 65 | 6e 74 72 79 20 73 65 70 |h each e|ntry sep|
|00001b30| 61 72 61 74 65 64 20 62 | 79 20 77 68 69 74 65 73 |arated b|y whites|
|00001b40| 70 61 63 65 2e 20 20 54 | 68 65 20 66 69 72 73 74 |pace. T|he first|
|00001b50| 20 65 6e 74 72 79 20 6f | 66 20 65 61 63 68 20 72 | entry o|f each r|
|00001b60| 6f 77 20 69 73 20 74 68 | 65 20 61 74 6f 6d 69 63 |ow is th|e atomic|
|00001b70| 20 73 79 6d 62 6f 6c 2c | 20 61 6e 64 20 74 68 65 | symbol,| and the|
|00001b80| 20 6e 65 78 74 20 74 68 | 72 65 65 20 61 72 65 20 | next th|ree are |
|00001b90| 74 68 65 20 58 2c 20 59 | 20 61 6e 64 20 5a 20 63 |the X, Y| and Z c|
|00001ba0| 6f 6f 72 64 69 6e 61 74 | 65 73 20 6f 66 20 74 68 |oordinat|es of th|
|00001bb0| 65 20 61 74 6f 6d 2e 20 | 20 54 68 65 6e 20 6d 6f |e atom. | Then mo|
|00001bc0| 72 65 20 77 68 69 74 65 | 73 70 61 63 65 20 61 6e |re white|space an|
|00001bd0| 64 20 61 6e 6f 74 68 65 | 72 20 72 6f 77 2e 20 20 |d anothe|r row. |
|00001be0| 54 68 69 73 20 63 61 6e | 20 63 6f 6e 74 69 6e 75 |This can| continu|
|00001bf0| 65 20 66 6f 72 20 61 73 | 20 6d 61 6e 79 20 72 6f |e for as| many ro|
|00001c00| 77 73 20 61 73 20 79 6f | 75 20 6c 69 6b 65 2e 0d |ws as yo|u like..|
|00001c10| 0d 49 6e 20 4d 75 6c 74 | 69 70 6c 61 6e 2c 20 73 |.In Mult|iplan, s|
|00001c20| 65 74 20 75 70 20 61 20 | 34 20 78 20 4e 20 61 72 |et up a |4 x N ar|
|00001c30| 65 61 20 77 69 74 68 20 | 74 68 65 20 66 69 72 73 |ea with |the firs|
|00001c40| 74 20 63 6f 6c 75 6d 6e | 20 74 68 65 20 61 74 6f |t column| the ato|
|00001c50| 6d 69 63 20 73 79 6d 62 | 6f 6c 2c 20 74 68 65 20 |mic symb|ol, the |
|00001c60| 73 65 63 6f 6e 64 20 63 | 6f 6c 75 6d 6e 20 74 68 |second c|olumn th|
|00001c70| 65 20 58 20 63 6f 6f 72 | 64 69 6e 61 74 65 2c 20 |e X coor|dinate, |
|00001c80| 74 68 65 20 74 68 69 72 | 64 20 63 6f 6c 75 6d 6e |the thir|d column|
|00001c90| 20 74 68 65 20 59 20 63 | 6f 6f 72 64 69 6e 61 74 | the Y c|oordinat|
|00001ca0| 65 2c 20 61 6e 64 20 74 | 68 65 20 66 6f 75 72 74 |e, and t|he fourt|
|00001cb0| 68 20 63 6f 6c 75 6d 6e | 20 74 68 65 20 5a 20 63 |h column| the Z c|
|00001cc0| 6f 6f 72 64 69 6e 61 74 | 65 2e 20 20 54 68 65 6e |oordinat|e. Then|
|00001cd0| 20 63 6f 70 79 20 74 68 | 65 20 61 72 65 61 20 74 | copy th|e area t|
|00001ce0| 6f 20 74 68 65 20 43 6c | 69 70 62 6f 61 72 64 2c |o the Cl|ipboard,|
|00001cf0| 20 61 6e 64 2c 20 77 69 | 74 68 6f 75 74 20 74 75 | and, wi|thout tu|
|00001d00| 72 6e 69 6e 67 20 74 68 | 65 20 63 6f 6d 70 75 74 |rning th|e comput|
|00001d10| 65 72 20 6f 66 66 2c 20 | 72 75 6e 20 4d 6f 6c 65 |er off, |run Mole|
|00001d20| 63 75 6c 61 72 20 45 64 | 69 74 6f 72 20 61 6e 64 |cular Ed|itor and|
|00001d30| 20 70 61 73 74 65 20 74 | 68 65 20 74 61 62 6c 65 | paste t|he table|
|00001d40| 20 69 6e 74 6f 20 74 68 | 65 20 63 75 72 72 65 6e | into th|e curren|
|00001d50| 74 20 4d 6f 6c 65 63 75 | 6c 65 2e 20 20 54 68 65 |t Molecu|le. The|
|00001d60| 20 63 6f 6e 6e 65 63 74 | 69 76 69 74 79 20 63 61 | connect|ivity ca|
|00001d70| 6e 20 62 65 20 65 6e 74 | 65 72 65 64 20 74 68 72 |n be ent|ered thr|
|00001d80| 6f 75 67 68 20 74 68 65 | 20 6f 6e 2d 73 63 72 65 |ough the| on-scre|
|00001d90| 65 6e 20 65 64 69 74 69 | 6e 67 20 63 61 70 61 62 |en editi|ng capab|
|00001da0| 69 6c 69 74 69 65 73 2e | 00 00 00 01 57 4d 6f 6c |ilities.|....WMol|
|00001db0| 65 63 75 6c 65 73 20 63 | 61 6e 20 62 65 20 73 61 |ecules c|an be sa|
|00001dc0| 76 65 64 20 74 6f 20 64 | 69 73 6b 20 77 69 74 68 |ved to d|isk with|
|00001dd0| 20 74 68 65 20 53 61 76 | 65 20 69 74 65 6d 73 20 | the Sav|e items |
|00001de0| 69 6e 20 74 68 65 20 46 | 69 6c 65 20 6d 65 6e 75 |in the F|ile menu|
|00001df0| 2e 20 20 46 69 6c 65 20 | 73 69 7a 65 73 20 61 72 |. File |sizes ar|
|00001e00| 65 20 72 65 6c 61 74 69 | 76 65 6c 79 20 73 6d 61 |e relati|vely sma|
|00001e10| 6c 6c 2c 20 61 76 65 72 | 61 67 69 6e 67 20 61 72 |ll, aver|aging ar|
|00001e20| 6f 75 6e 64 20 32 4b 20 | 62 79 74 65 73 20 69 6e |ound 2K |bytes in|
|00001e30| 20 6c 65 6e 67 74 68 2e | 20 20 57 68 65 6e 20 61 | length.| When a|
|00001e40| 20 6d 6f 6c 65 63 75 6c | 65 20 69 73 20 73 61 76 | molecul|e is sav|
|00001e50| 65 64 2c 20 61 6c 6c 20 | 69 6e 66 6f 72 6d 61 74 |ed, all |informat|
|00001e60| 69 6f 6e 20 61 62 6f 75 | 74 20 68 6f 77 20 74 68 |ion abou|t how th|
|00001e70| 65 20 6d 6f 6c 65 63 75 | 6c 65 20 69 73 20 64 72 |e molecu|le is dr|
|00001e80| 61 77 6e 20 69 73 20 73 | 61 76 65 64 20 61 6c 6f |awn is s|aved alo|
|00001e90| 6e 67 20 77 69 74 68 20 | 74 68 65 20 6d 6f 6c 65 |ng with |the mole|
|00001ea0| 63 75 6c 65 20 69 74 73 | 65 6c 66 2c 20 73 6f 20 |cule its|elf, so |
|00001eb0| 74 68 61 74 20 77 68 65 | 6e 20 74 68 65 20 6d 6f |that whe|n the mo|
|00001ec0| 6c 65 63 75 6c 65 20 66 | 69 6c 65 20 69 73 20 6c |lecule f|ile is l|
|00001ed0| 61 74 65 72 20 6f 70 65 | 6e 65 64 2c 20 74 68 65 |ater ope|ned, the|
|00001ee0| 20 70 72 65 76 69 6f 75 | 73 20 73 65 74 74 69 6e | previou|s settin|
|00001ef0| 67 73 20 63 61 6e 20 62 | 65 20 72 65 73 74 6f 72 |gs can b|e restor|
|00001f00| 65 64 2e 00 00 00 00 f4 | 54 68 65 20 73 69 7a 65 |ed......|The size|
|00001f10| 20 6f 66 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 | of the |molecule|
|00001f20| 20 63 61 6e 20 62 65 20 | 63 6f 6e 74 72 6f 6c 6c | can be |controll|
|00001f30| 65 64 20 74 68 72 6f 75 | 67 68 20 74 68 65 20 53 |ed throu|gh the S|
|00001f40| 63 61 6c 65 20 4d 6f 64 | 65 6c 20 69 74 65 6d 20 |cale Mod|el item |
|00001f50| 69 6e 20 74 68 65 20 44 | 72 61 77 20 4d 65 6e 75 |in the D|raw Menu|
|00001f60| 2e 20 20 54 68 69 73 20 | 64 69 73 70 6c 61 79 73 |. This |displays|
|00001f70| 20 61 20 70 72 6f 70 6f | 72 74 69 6f 6e 61 6c 6c | a propo|rtionall|
|00001f80| 79 20 73 69 7a 65 64 20 | 6d 6f 6c 65 63 75 6c 65 |y sized |molecule|
|00001f90| 20 69 6e 20 77 69 72 65 | 66 72 61 6d 65 20 6d 6f | in wire|frame mo|
|00001fa0| 64 65 20 74 68 61 74 20 | 63 61 6e 20 62 65 20 72 |de that |can be r|
|00001fb0| 65 73 63 61 6c 65 64 20 | 74 6f 20 62 65 20 73 6d |escaled |to be sm|
|00001fc0| 61 6c 6c 65 72 20 6f 72 | 20 6c 61 72 67 65 72 20 |aller or| larger |
|00001fd0| 62 61 73 65 64 20 75 70 | 6f 6e 20 74 68 65 20 73 |based up|on the s|
|00001fe0| 65 74 74 69 6e 67 20 6f | 66 20 74 68 65 20 73 63 |etting o|f the sc|
|00001ff0| 72 6f 6c 6c 20 62 61 72 | 2e 20 20 00 00 00 00 d9 |roll bar|. .....|
|00002000| 42 6f 6e 64 73 20 6d 61 | 79 20 61 70 70 65 61 72 |Bonds ma|y appear|
|00002010| 20 65 69 74 68 65 72 20 | 61 73 20 66 69 6c 6c 65 | either |as fille|
|00002020| 64 20 6f 72 20 77 69 72 | 65 66 72 61 6d 65 20 62 |d or wir|eframe b|
|00002030| 6f 6e 64 73 2e 20 20 57 | 69 72 65 66 72 61 6d 65 |onds. W|ireframe|
|00002040| 20 69 73 20 6a 75 73 74 | 20 61 20 6c 69 6e 65 20 | is just| a line |
|00002050| 73 65 67 6d 65 6e 74 2c | 20 61 6e 64 20 74 68 65 |segment,| and the|
|00002060| 20 66 69 6c 6c 65 64 20 | 62 6f 6e 64 73 20 61 72 | filled |bonds ar|
|00002070| 65 20 72 65 63 74 61 6e | 67 6c 65 73 20 66 69 6c |e rectan|gles fil|
|00002080| 6c 65 64 20 77 69 74 68 | 20 61 20 73 70 65 63 69 |led with| a speci|
|00002090| 66 69 63 20 70 61 74 74 | 65 72 6e 73 2e 20 20 55 |fic patt|erns. U|
|000020a0| 73 69 6e 67 20 77 69 72 | 65 66 72 61 6d 65 20 62 |sing wir|eframe b|
|000020b0| 6f 6e 64 73 20 73 70 65 | 65 64 73 20 74 68 65 20 |onds spe|eds the |
|000020c0| 64 72 61 77 69 6e 67 20 | 6f 66 20 74 68 65 20 6d |drawing |of the m|
|000020d0| 6f 6c 65 63 75 6c 65 2e | 00 00 00 03 da 54 68 65 |olecule.|.....The|
|000020e0| 72 65 20 61 72 65 20 73 | 6f 6d 65 20 73 70 65 63 |re are s|ome spec|
|000020f0| 69 61 6c 20 6b 65 79 73 | 2c 20 77 68 69 63 68 2c |ial keys|, which,|
|00002100| 20 20 77 68 65 6e 20 68 | 65 6c 64 20 64 6f 77 6e | when h|eld down|
|00002110| 20 69 6e 20 63 6f 6e 6a | 75 6e 63 74 69 6f 6e 20 | in conj|unction |
|00002120| 77 69 74 68 20 6f 74 68 | 65 72 20 6f 70 65 72 61 |with oth|er opera|
|00002130| 74 69 6f 6e 73 2c 20 61 | 66 66 65 63 74 20 74 68 |tions, a|ffect th|
|00002140| 65 20 6d 65 61 6e 69 6e | 67 20 6f 66 20 74 68 65 |e meanin|g of the|
|00002150| 20 6f 70 65 72 61 74 69 | 6f 6e 2e 20 20 54 68 65 | operati|on. The|
|00002160| 73 65 20 6b 65 79 73 20 | 61 72 65 20 74 68 65 20 |se keys |are the |
|00002170| 4f 70 74 69 6f 6e 2c 20 | 43 6f 6d 6d 61 6e 64 20 |Option, |Command |
|00002180| 61 6e 64 20 53 68 69 66 | 74 20 6b 65 79 73 2e 0d |and Shif|t keys..|
|00002190| 0d 54 68 65 20 43 6f 6d | 6d 61 6e 64 20 6b 65 79 |.The Com|mand key|
|000021a0| 20 77 68 65 6e 20 68 65 | 6c 64 20 64 6f 77 6e 20 | when he|ld down |
|000021b0| 77 69 74 68 20 61 20 6c | 65 74 74 65 72 20 77 69 |with a l|etter wi|
|000021c0| 6c 6c 20 73 65 6c 65 63 | 74 20 74 68 65 20 6d 65 |ll selec|t the me|
|000021d0| 6e 75 20 69 74 65 6d 20 | 61 73 73 6f 63 69 61 74 |nu item |associat|
|000021e0| 65 64 20 77 69 74 68 20 | 74 68 65 20 6c 65 74 74 |ed with |the lett|
|000021f0| 65 72 2c 20 69 66 20 69 | 74 20 65 78 69 73 74 73 |er, if i|t exists|
|00002200| 2e 0d 0d 41 6e 20 4f 70 | 74 69 6f 6e 2d 63 6c 69 |...An Op|tion-cli|
|00002210| 63 6b 20 61 63 74 69 6f | 6e 20 63 6f 6e 73 69 73 |ck actio|n consis|
|00002220| 74 73 20 6f 66 20 68 6f | 6c 64 69 6e 67 20 74 68 |ts of ho|lding th|
|00002230| 65 20 6f 70 74 69 6f 6e | 20 6b 65 79 20 64 6f 77 |e option| key dow|
|00002240| 6e 20 6a 75 73 74 20 62 | 65 66 6f 72 65 20 70 72 |n just b|efore pr|
|00002250| 65 73 73 69 6e 67 20 74 | 68 65 20 6d 6f 75 73 65 |essing t|he mouse|
|00002260| 20 62 75 74 74 6f 6e 2e | 20 20 41 66 74 65 72 20 | button.| After |
|00002270| 70 72 65 73 73 69 6e 67 | 20 74 68 65 20 6d 6f 75 |pressing| the mou|
|00002280| 73 65 20 62 75 74 74 6f | 6e 2c 20 74 68 65 20 6b |se butto|n, the k|
|00002290| 65 79 20 6d 61 79 20 62 | 65 20 72 65 6c 65 61 73 |ey may b|e releas|
|000022a0| 65 64 2e 0d 0d 41 6e 20 | 4f 70 74 69 6f 6e 2d 43 |ed...An |Option-C|
|000022b0| 6f 6d 6d 61 6e 64 20 63 | 6c 69 63 6b 20 63 6f 6e |ommand c|lick con|
|000022c0| 73 69 73 74 73 20 6f 66 | 20 68 6f 6c 64 69 6e 67 |sists of| holding|
|000022d0| 20 62 6f 74 68 20 74 68 | 65 20 4f 70 74 69 6f 6e | both th|e Option|
|000022e0| 20 61 6e 64 20 43 6f 6d | 6d 61 6e 64 20 6b 65 79 | and Com|mand key|
|000022f0| 73 20 64 6f 77 6e 20 73 | 69 6d 75 6c 74 61 6e 65 |s down s|imultane|
|00002300| 6f 75 73 6c 79 20 77 68 | 69 6c 65 20 63 6c 69 63 |ously wh|ile clic|
|00002310| 6b 69 6e 67 2e 0d 0d 41 | 20 53 68 69 66 74 2d 63 |king...A| Shift-c|
|00002320| 6c 69 63 6b 20 6d 65 61 | 6e 73 20 68 6f 6c 64 69 |lick mea|ns holdi|
|00002330| 6e 67 20 74 68 65 20 53 | 68 69 66 74 20 6b 65 79 |ng the S|hift key|
|00002340| 20 64 6f 77 6e 20 77 68 | 69 6c 65 20 70 72 65 73 | down wh|ile pres|
|00002350| 73 69 6e 67 20 74 68 65 | 20 6d 6f 75 73 65 20 62 |sing the| mouse b|
|00002360| 75 74 74 6f 6e 2e 0d 0d | 49 66 20 74 68 65 72 65 |utton...|If there|
|00002370| 20 69 73 20 61 20 6d 65 | 6e 75 20 6b 65 79 20 65 | is a me|nu key e|
|00002380| 71 75 69 76 61 6c 65 6e | 74 2c 20 74 68 65 20 6d |quivalen|t, the m|
|00002390| 6f 64 69 66 69 65 72 20 | 6b 65 79 73 20 61 72 65 |odifier |keys are|
|000023a0| 20 73 74 69 6c 6c 20 61 | 70 70 6c 69 65 64 20 74 | still a|pplied t|
|000023b0| 6f 20 74 68 65 20 43 6f | 6d 6d 61 6e 64 2d 6c 65 |o the Co|mmand-le|
|000023c0| 74 74 65 72 20 73 65 71 | 75 65 6e 63 65 20 77 68 |tter seq|uence wh|
|000023d0| 65 6e 20 73 65 6c 65 63 | 74 69 6e 67 20 61 20 6d |en selec|ting a m|
|000023e0| 65 6e 75 20 69 74 65 6d | 2e 0d 0d 54 68 72 6f 75 |enu item|...Throu|
|000023f0| 67 68 6f 75 74 20 74 68 | 65 20 70 72 6f 67 72 61 |ghout th|e progra|
|00002400| 6d 20 74 68 65 20 6d 6f | 64 69 66 69 65 72 20 6b |m the mo|difier k|
|00002410| 65 79 73 20 68 61 76 65 | 20 74 68 65 20 73 61 6d |eys have| the sam|
|00002420| 65 20 62 61 73 69 63 20 | 6d 65 61 6e 69 6e 67 73 |e basic |meanings|
|00002430| 2e 20 20 54 68 65 73 65 | 20 61 72 65 3a 0d 0d 4f |. These| are:..O|
|00002440| 70 74 69 6f 6e 20 2d 20 | 6d 6f 76 69 6e 67 20 61 |ption - |moving a|
|00002450| 6e 20 69 6d 61 67 65 20 | 6f 72 20 6d 6f 64 69 66 |n image |or modif|
|00002460| 69 63 61 74 69 6f 6e 2e | 0d 43 6f 6d 6d 61 6e 64 |ication.|.Command|
|00002470| 20 2d 20 6e 6f 74 20 6e | 65 63 65 73 73 61 72 69 | - not n|ecessari|
|00002480| 6c 79 20 69 6e 20 74 68 | 65 20 58 59 20 70 6c 61 |ly in th|e XY pla|
|00002490| 6e 65 2e 0d 53 68 69 66 | 74 20 2d 20 61 20 63 6f |ne..Shif|t - a co|
|000024a0| 6e 73 74 72 61 69 6e 74 | 20 6f 72 20 69 6e 73 65 |nstraint| or inse|
|000024b0| 72 74 69 6f 6e 2e 00 00 | 00 01 13 54 68 65 20 43 |rtion...|...The C|
|000024c0| 6f 6e 6e 65 63 74 69 6f | 6e 20 54 61 62 6c 65 20 |onnectio|n Table |
|000024d0| 64 69 73 70 6c 61 79 73 | 20 74 68 65 20 63 6f 6e |displays| the con|
|000024e0| 6e 65 63 74 69 76 69 74 | 79 20 6f 66 20 74 68 65 |nectivit|y of the|
|000024f0| 20 6d 6f 6c 65 63 75 6c | 65 2e 20 20 57 68 65 6e | molecul|e. When|
|00002500| 20 63 72 65 61 74 69 6e | 67 20 74 68 65 20 6d 6f | creatin|g the mo|
|00002510| 6c 65 63 75 6c 65 2c 20 | 62 6f 6e 64 73 20 61 72 |lecule, |bonds ar|
|00002520| 65 20 66 6f 72 6d 65 64 | 20 62 65 74 77 65 65 6e |e formed| between|
|00002530| 20 61 74 6f 6d 73 2c 20 | 74 68 75 73 20 64 65 66 | atoms, |thus def|
|00002540| 69 6e 69 6e 67 20 74 68 | 65 20 63 6f 6e 6e 65 63 |ining th|e connec|
|00002550| 74 69 76 69 74 79 20 6f | 66 20 74 68 65 20 6d 6f |tivity o|f the mo|
|00002560| 6c 65 63 75 6c 65 2e 20 | 45 61 63 68 20 61 74 6f |lecule. |Each ato|
|00002570| 6d 20 69 73 20 67 69 76 | 65 6e 20 61 20 6e 75 6d |m is giv|en a num|
|00002580| 62 65 72 20 61 6e 64 20 | 74 68 65 20 63 6f 6e 6e |ber and |the conn|
|00002590| 65 63 74 69 76 69 74 79 | 20 6f 66 20 61 20 62 6f |ectivity| of a bo|
|000025a0| 6e 64 20 69 73 20 74 68 | 65 20 74 79 70 65 20 6f |nd is th|e type o|
|000025b0| 66 20 62 6f 6e 64 20 61 | 74 74 61 63 68 65 64 20 |f bond a|ttached |
|000025c0| 74 6f 20 74 77 6f 20 61 | 74 6f 6d 73 2e 00 00 00 |to two a|toms....|
|000025d0| 00 fd 54 68 65 72 65 20 | 61 72 65 20 74 68 72 65 |..There |are thre|
|000025e0| 65 20 6d 61 69 6e 20 77 | 69 6e 64 6f 77 73 20 69 |e main w|indows i|
|000025f0| 6e 20 4d 6f 6c 65 63 75 | 6c 61 72 20 45 64 69 74 |n Molecu|lar Edit|
|00002600| 6f 72 3a 20 28 31 29 20 | 74 68 65 20 73 65 6c 65 |or: (1) |the sele|
|00002610| 63 74 69 6f 6e 20 70 61 | 6c 65 74 74 65 2c 20 28 |ction pa|lette, (|
|00002620| 32 29 20 74 68 65 20 57 | 6f 72 6b 73 68 65 65 74 |2) the W|orksheet|
|00002630| 20 61 6e 64 20 28 33 29 | 20 74 68 65 20 43 6c 69 | and (3)| the Cli|
|00002640| 70 62 6f 61 72 64 2e 20 | 20 54 68 65 72 65 20 61 |pboard. | There a|
|00002650| 72 65 20 61 6c 73 6f 20 | 61 20 6e 75 6d 62 65 72 |re also |a number|
|00002660| 20 6f 66 20 6f 74 68 65 | 72 20 77 69 6e 64 6f 77 | of othe|r window|
|00002670| 73 20 74 68 61 74 20 61 | 70 70 65 61 72 20 66 72 |s that a|ppear fr|
|00002680| 6f 6d 20 74 69 6d 65 20 | 74 6f 20 74 69 6d 65 20 |om time |to time |
|00002690| 74 68 61 74 20 64 69 73 | 70 6c 61 79 20 6d 65 73 |that dis|play mes|
|000026a0| 73 61 67 65 73 20 77 68 | 69 63 68 20 61 6c 6c 6f |sages wh|ich allo|
|000026b0| 77 20 73 6f 6d 65 20 61 | 63 74 69 6f 6e 20 74 6f |w some a|ction to|
|000026c0| 20 62 65 20 70 65 72 66 | 6f 72 6d 65 64 2e 00 00 | be perf|ormed...|
|000026d0| 00 01 2d 4d 6f 64 69 66 | 69 65 64 20 76 65 72 73 |..-Modif|ied vers|
|000026e0| 69 6f 6e 73 20 6f 66 20 | 43 68 69 63 61 67 6f 20 |ions of |Chicago |
|000026f0| 31 32 20 61 6e 64 20 47 | 65 6e 65 76 61 20 39 2c |12 and G|eneva 9,|
|00002700| 20 77 68 69 63 68 20 68 | 61 76 65 20 73 75 62 73 | which h|ave subs|
|00002710| 63 72 69 70 74 65 64 20 | 6e 75 6d 62 65 72 73 2c |cripted |numbers,|
|00002720| 20 63 6f 6d 65 20 77 69 | 74 68 20 74 68 65 20 4d | come wi|th the M|
|00002730| 6f 6c 65 63 75 6c 61 72 | 20 45 64 69 74 6f 72 20 |olecular| Editor |
|00002740| 64 69 73 6b 2e 20 20 53 | 75 62 73 63 72 69 70 74 |disk. S|ubscript|
|00002750| 73 20 63 61 6e 20 62 65 | 20 67 65 6e 65 72 61 74 |s can be| generat|
|00002760| 65 64 20 62 79 20 68 6f | 6c 64 69 6e 67 20 74 68 |ed by ho|lding th|
|00002770| 65 20 4f 70 74 69 6f 6e | 20 6b 65 79 20 61 6e 64 |e Option| key and|
|00002780| 20 70 72 65 73 73 69 6e | 67 20 74 68 65 20 64 65 | pressin|g the de|
|00002790| 73 69 72 65 64 20 6e 75 | 6d 62 65 72 2e 20 20 0d |sired nu|mber. .|
|000027a0| 57 69 74 68 20 73 75 62 | 73 63 72 69 70 74 73 20 |With sub|scripts |
|000027b0| 69 74 20 69 73 20 70 6f | 73 73 69 62 6c 65 20 74 |it is po|ssible t|
|000027c0| 6f 20 67 69 76 65 20 63 | 6f 72 72 65 63 74 20 63 |o give c|orrect c|
|000027d0| 68 65 6d 69 63 61 6c 20 | 6e 61 6d 65 73 20 74 6f |hemical |names to|
|000027e0| 20 6d 6f 6c 65 63 75 6c | 65 73 2c 20 73 75 63 68 | molecul|es, such|
|000027f0| 20 61 73 20 43 48 a2 20 | 6f 72 20 48 aa 4f 2e 00 | as CH. |or H.O..|
|00002800| 00 00 02 1a 54 68 65 20 | 43 6c 69 70 62 6f 61 72 |....The |Clipboar|
|00002810| 64 20 69 73 20 75 73 65 | 64 20 74 6f 20 74 72 61 |d is use|d to tra|
|00002820| 6e 73 66 65 72 20 64 61 | 74 61 20 66 72 6f 6d 20 |nsfer da|ta from |
|00002830| 6f 6e 65 20 6d 6f 6c 65 | 63 75 6c 65 20 74 6f 20 |one mole|cule to |
|00002840| 61 6e 6f 74 68 65 72 2c | 20 6f 72 20 66 72 6f 6d |another,| or from|
|00002850| 20 6f 6e 65 20 70 61 72 | 74 20 6f 66 20 61 20 6d | one par|t of a m|
|00002860| 6f 6c 65 63 75 6c 65 20 | 74 6f 20 61 6e 6f 74 68 |olecule |to anoth|
|00002870| 65 72 2c 20 6f 72 20 66 | 72 6f 6d 20 6f 6e 65 20 |er, or f|rom one |
|00002880| 70 72 6f 67 72 61 6d 20 | 74 6f 20 61 6e 6f 74 68 |program |to anoth|
|00002890| 65 72 2e 20 20 4d 6f 6c | 65 63 75 6c 61 72 20 45 |er. Mol|ecular E|
|000028a0| 64 69 74 6f 72 20 69 73 | 20 63 61 70 61 62 6c 65 |ditor is| capable|
|000028b0| 20 6f 66 20 72 65 61 64 | 69 6e 67 20 43 6c 69 70 | of read|ing Clip|
|000028c0| 62 6f 61 72 64 73 20 77 | 69 74 68 20 74 65 78 74 |boards w|ith text|
|000028d0| 20 61 6e 64 20 77 69 74 | 68 20 69 74 d5 73 20 6f | and wit|h it.s o|
|000028e0| 77 6e 20 73 70 65 63 69 | 61 6c 20 74 79 70 65 20 |wn speci|al type |
|000028f0| 22 4d 4f 4c 45 22 2e 20 | 20 49 74 20 63 61 6e 20 |"MOLE". | It can |
|00002900| 77 72 69 74 65 20 43 6c | 69 70 62 6f 61 72 64 73 |write Cl|ipboards|
|00002910| 20 6f 66 20 74 79 70 65 | 20 22 50 49 43 54 22 20 | of type| "PICT" |
|00002920| 61 6e 64 20 6f 66 20 74 | 79 70 65 20 22 4d 4f 4c |and of t|ype "MOL|
|00002930| 45 22 2e 20 20 41 6e 79 | 20 6f 74 68 65 72 20 70 |E". Any| other p|
|00002940| 72 6f 67 72 61 6d 20 77 | 68 69 63 68 20 72 65 61 |rogram w|hich rea|
|00002950| 64 73 20 70 69 63 74 75 | 72 65 73 20 63 61 6e 20 |ds pictu|res can |
|00002960| 68 61 76 65 20 61 20 70 | 69 63 74 75 72 65 20 6f |have a p|icture o|
|00002970| 66 20 61 20 6d 6f 6c 65 | 63 75 6c 65 20 70 61 73 |f a mole|cule pas|
|00002980| 74 65 64 20 69 6e 74 6f | 20 69 74 2e 0d 0d 4e 4f |ted into| it...NO|
|00002990| 54 45 3a 20 20 49 74 20 | 69 73 20 6f 6e 6c 79 20 |TE: It |is only |
|000029a0| 70 6f 73 73 69 62 6c 65 | 20 74 6f 20 63 6f 70 79 |possible| to copy|
|000029b0| 20 74 68 65 20 70 69 63 | 74 75 72 65 20 6f 66 20 | the pic|ture of |
|000029c0| 74 68 65 20 6d 6f 6c 65 | 63 75 6c 65 20 6f 6e 20 |the mole|cule on |
|000029d0| 61 20 4d 61 63 69 6e 74 | 6f 73 68 20 77 69 74 68 |a Macint|osh with|
|000029e0| 20 61 74 20 6c 65 61 73 | 74 20 32 34 30 4b 20 62 | at leas|t 240K b|
|000029f0| 79 74 65 73 20 6f 66 20 | 6d 65 6d 6f 72 79 20 61 |ytes of |memory a|
|00002a00| 6c 6c 6f 63 61 74 65 64 | 20 74 6f 20 4d 6f 6c 65 |llocated| to Mole|
|00002a10| 63 75 6c 61 72 20 45 64 | 69 74 6f 72 2e 00 00 00 |cular Ed|itor....|
|00002a20| 01 da 53 6f 6d 65 20 6d | 6f 6c 65 63 75 6c 65 73 |..Some m|olecules|
|00002a30| 20 77 69 6c 6c 20 74 61 | 6b 65 20 61 20 77 68 69 | will ta|ke a whi|
|00002a40| 6c 65 20 20 74 6f 20 62 | 65 20 64 72 61 77 6e 2e |le to b|e drawn.|
|00002a50| 20 20 49 6e 73 74 65 61 | 64 20 6f 66 20 67 72 61 | Instea|d of gra|
|00002a60| 62 62 69 6e 67 20 61 20 | 63 75 70 20 6f 66 20 63 |bbing a |cup of c|
|00002a70| 6f 66 66 65 65 2c 20 77 | 68 79 20 6e 6f 74 20 63 |offee, w|hy not c|
|00002a80| 6f 6e 73 69 64 65 72 20 | 73 6f 6d 65 20 6f 66 20 |onsider |some of |
|00002a90| 74 68 65 20 66 6f 6c 6c | 6f 77 69 6e 67 20 61 64 |the foll|owing ad|
|00002aa0| 76 69 63 65 3a 0d 0d 2d | 20 77 69 72 65 66 72 61 |vice:..-| wirefra|
|00002ab0| 6d 65 20 6d 6f 6c 65 63 | 75 6c 65 73 20 77 69 74 |me molec|ules wit|
|00002ac0| 68 20 6e 6f 20 61 74 6f | 6d 73 20 64 72 61 77 20 |h no ato|ms draw |
|00002ad0| 74 68 65 20 66 61 73 74 | 65 73 74 2e 0d 2d 20 75 |the fast|est..- u|
|00002ae0| 73 69 6e 67 20 77 69 72 | 65 66 72 61 6d 65 20 62 |sing wir|eframe b|
|00002af0| 6f 6e 64 73 20 73 70 65 | 65 64 73 20 75 70 20 74 |onds spe|eds up t|
|00002b00| 68 65 20 64 72 61 77 69 | 6e 67 20 70 72 6f 63 65 |he drawi|ng proce|
|00002b10| 73 73 20 63 6f 6e 73 69 | 64 65 72 61 62 6c 79 2e |ss consi|derably.|
|00002b20| 0d 2d 20 6e 6f 74 20 64 | 72 61 77 69 6e 67 20 61 |.- not d|rawing a|
|00002b30| 74 6f 6d 73 20 61 6c 73 | 6f 20 73 70 65 65 64 73 |toms als|o speeds|
|00002b40| 20 75 70 20 74 68 65 20 | 64 72 61 77 69 6e 67 20 | up the |drawing |
|00002b50| 6f 66 20 74 68 65 20 6d | 6f 6c 65 63 75 6c 65 2e |of the m|olecule.|
|00002b60| 0d 2d 20 64 6f 6e d5 74 | 20 73 68 61 64 65 20 74 |.- don.t| shade t|
|00002b70| 68 65 20 61 74 6f 6d 73 | 20 77 68 65 6e 20 64 72 |he atoms| when dr|
|00002b80| 61 77 69 6e 67 2e 0d 2d | 20 74 68 65 20 6d 6f 6c |awing..-| the mol|
|00002b90| 65 63 75 6c 65 20 69 73 | 20 64 72 61 77 6e 20 66 |ecule is| drawn f|
|00002ba0| 61 73 74 65 72 20 77 68 | 65 6e 20 74 68 65 20 49 |aster wh|en the I|
|00002bb0| 64 65 6e 74 69 74 79 20 | 69 73 20 73 65 74 2e 0d |dentity |is set..|
|00002bc0| 2d 20 74 68 65 20 51 75 | 69 63 6b 20 27 4e 27 20 |- the Qu|ick 'N' |
|00002bd0| 44 69 72 74 79 20 6f 70 | 74 69 6f 6e 20 73 70 65 |Dirty op|tion spe|
|00002be0| 65 64 73 20 75 70 20 74 | 68 65 20 64 72 61 77 69 |eds up t|he drawi|
|00002bf0| 6e 67 20 70 72 6f 63 65 | 73 73 2e 00 00 00 02 c7 |ng proce|ss......|
|00002c00| 4d 6f 6c 65 63 75 6c 61 | 72 20 45 64 69 74 6f 72 |Molecula|r Editor|
|00002c10| 20 69 73 20 61 20 6d 65 | 6d 6f 72 79 20 68 75 6e | is a me|mory hun|
|00002c20| 67 72 79 20 61 70 70 6c | 69 63 61 74 69 6f 6e 2c |gry appl|ication,|
|00002c30| 20 61 6e 64 20 6f 70 65 | 72 61 74 69 6e 67 20 20 | and ope|rating |
|00002c40| 69 74 20 6f 6e 20 61 20 | 31 32 38 4b 20 4d 61 63 |it on a |128K Mac|
|00002c50| 69 6e 74 6f 73 68 20 69 | 73 20 6c 69 6d 69 74 69 |intosh i|s limiti|
|00002c60| 6e 67 2e 20 20 46 6f 72 | 20 62 65 73 74 20 72 65 |ng. For| best re|
|00002c70| 73 75 6c 74 73 2c 20 72 | 75 6e 20 4d 6f 6c 65 63 |sults, r|un Molec|
|00002c80| 75 6c 61 72 20 45 64 69 | 74 6f 72 20 6f 6e 20 61 |ular Edi|tor on a|
|00002c90| 20 35 31 32 4b 20 6f 72 | 20 67 72 65 61 74 65 72 | 512K or| greater|
|00002ca0| 20 4d 61 63 2e 0d 0d 57 | 68 65 6e 20 72 75 6e 6e | Mac...W|hen runn|
|00002cb0| 69 6e 67 20 6f 6e 20 61 | 20 31 32 38 4b 20 4d 61 |ing on a| 128K Ma|
|00002cc0| 63 69 6e 74 6f 73 68 2c | 20 68 65 72 65 20 69 73 |cintosh,| here is|
|00002cd0| 20 73 6f 6d 65 20 61 64 | 76 69 73 65 20 74 6f 20 | some ad|vise to |
|00002ce0| 6b 65 65 70 20 6d 65 6d | 6f 72 79 20 70 72 6f 62 |keep mem|ory prob|
|00002cf0| 6c 65 6d 73 20 74 6f 20 | 61 20 6d 69 6e 69 6d 75 |lems to |a minimu|
|00002d00| 6d 3a 0d 2d 20 77 6f 72 | 6b 20 77 69 74 68 20 6f |m:.- wor|k with o|
|00002d10| 6e 6c 79 20 6f 6e 65 20 | 6f 72 20 74 77 6f 20 6d |nly one |or two m|
|00002d20| 6f 6c 65 63 75 6c 65 73 | 20 61 74 20 61 20 74 69 |olecules| at a ti|
|00002d30| 6d 65 2e 0d 2d 20 73 65 | 6c 65 63 74 20 6f 6e 6c |me..- se|lect onl|
|00002d40| 79 20 73 6d 61 6c 6c 20 | 70 6f 72 74 69 6f 6e 73 |y small |portions|
|00002d50| 20 6f 66 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 | of the |molecule|
|00002d60| 2e 0d 2d 20 69 66 20 79 | 6f 75 20 68 61 76 65 20 |..- if y|ou have |
|00002d70| 73 6f 6d 65 74 68 69 6e | 67 20 73 65 6c 65 63 74 |somethin|g select|
|00002d80| 65 64 2c 20 61 6e 64 20 | 69 74 20 64 6f 65 73 6e |ed, and |it doesn|
|00002d90| d5 74 20 6e 65 65 64 20 | 74 6f 20 62 65 20 73 65 |.t need |to be se|
|00002da0| 6c 65 63 74 65 64 2c 20 | 75 6e 73 65 6c 65 63 74 |lected, |unselect|
|00002db0| 20 69 74 2e 0d 2d 20 70 | 72 69 6e 74 69 6e 67 20 | it..- p|rinting |
|00002dc0| 6d 61 79 20 62 65 20 64 | 69 66 66 69 63 75 6c 74 |may be d|ifficult|
|00002dd0| 2e 0d 2d 20 69 66 20 61 | 6e 20 6f 70 65 72 61 74 |..- if a|n operat|
|00002de0| 69 6f 6e 20 66 61 69 6c | 73 2c 20 72 65 2d 72 75 |ion fail|s, re-ru|
|00002df0| 6e 20 74 68 65 20 70 72 | 6f 67 72 61 6d 20 61 6e |n the pr|ogram an|
|00002e00| 64 20 74 72 79 20 74 6f | 20 63 6f 6d 70 6c 65 74 |d try to| complet|
|00002e10| 65 20 69 74 20 61 73 20 | 73 6f 6f 6e 20 61 73 20 |e it as |soon as |
|00002e20| 70 6f 73 73 69 62 6c 65 | 2e 0d 2d 20 6b 65 65 70 |possible|..- keep|
|00002e30| 20 73 6d 61 6c 6c 20 70 | 61 72 74 73 20 6f 66 20 | small p|arts of |
|00002e40| 74 68 65 20 6d 6f 6c 65 | 63 75 6c 65 20 69 6e 20 |the mole|cule in |
|00002e50| 74 68 65 20 43 6c 69 70 | 62 6f 61 72 64 2e 0d 2d |the Clip|board..-|
|00002e60| 20 64 6f 6e d5 74 20 75 | 73 65 20 64 65 73 6b 20 | don.t u|se desk |
|00002e70| 61 63 63 65 73 73 6f 72 | 69 65 73 2e 0d 2d 20 73 |accessor|ies..- s|
|00002e80| 63 61 6c 65 20 74 68 65 | 20 6d 6f 64 65 6c 20 73 |cale the| model s|
|00002e90| 6f 20 74 68 61 74 20 69 | 74 20 6f 63 63 75 70 69 |o that i|t occupi|
|00002ea0| 65 73 20 6f 6e 6c 79 20 | 61 20 73 6d 61 6c 6c 20 |es only |a small |
|00002eb0| 70 6f 72 74 69 6f 6e 20 | 6f 66 20 74 68 65 20 73 |portion |of the s|
|00002ec0| 63 72 65 65 6e 2e 00 00 | 00 03 04 49 6e 20 4d 6f |creen...|...In Mo|
|00002ed0| 6c 65 63 75 6c 61 72 20 | 45 64 69 74 6f 72 2c 20 |lecular |Editor, |
|00002ee0| 61 20 70 72 65 2d 77 72 | 69 74 74 65 6e 20 74 68 |a pre-wr|itten th|
|00002ef0| 72 65 65 20 64 69 6d 65 | 6e 73 69 6f 6e 61 6c 20 |ree dime|nsional |
|00002f00| 67 72 61 70 68 69 63 73 | 20 70 61 63 6b 61 67 65 |graphics| package|
|00002f10| 20 69 73 20 75 73 65 64 | 20 74 6f 20 67 65 6e 65 | is used| to gene|
|00002f20| 72 61 74 65 20 74 68 65 | 20 63 6f 6f 72 64 69 6e |rate the| coordin|
|00002f30| 61 74 65 73 20 6f 66 20 | 74 68 65 20 6f 6e 2d 73 |ates of |the on-s|
|00002f40| 63 72 65 65 6e 20 72 65 | 70 72 65 73 65 6e 74 61 |creen re|presenta|
|00002f50| 74 69 6f 6e 20 6f 66 20 | 74 68 65 20 6d 6f 6c 65 |tion of |the mole|
|00002f60| 63 75 6c 65 73 2e 20 20 | 54 68 65 20 63 6f 6f 72 |cules. |The coor|
|00002f70| 64 69 6e 61 74 65 20 73 | 79 73 74 65 6d 20 75 73 |dinate s|ystem us|
|00002f80| 65 64 20 69 73 20 72 69 | 67 68 74 2d 68 61 6e 64 |ed is ri|ght-hand|
|00002f90| 65 64 2c 20 20 77 69 74 | 68 20 74 68 65 20 5a 20 |ed, wit|h the Z |
|00002fa0| 61 78 69 73 20 63 6f 6d | 69 6e 67 20 6f 75 74 20 |axis com|ing out |
|00002fb0| 6f 66 20 74 68 65 20 70 | 6c 61 6e 65 20 6f 66 20 |of the p|lane of |
|00002fc0| 74 68 65 20 73 63 72 65 | 65 6e 2e 20 20 41 6c 6c |the scre|en. All|
|00002fd0| 20 72 6f 74 61 74 69 6f | 6e 73 20 61 6e 64 20 74 | rotatio|ns and t|
|00002fe0| 72 61 6e 73 6c 61 74 69 | 6f 6e 73 20 61 70 70 6c |ranslati|ons appl|
|00002ff0| 69 65 64 20 74 6f 20 74 | 68 65 20 6d 6f 6c 65 63 |ied to t|he molec|
|00003000| 75 6c 65 20 61 72 65 20 | 68 65 6c 64 20 69 6e 20 |ule are |held in |
|00003010| 61 20 6d 61 74 72 69 78 | 20 6b 6e 6f 77 6e 20 61 |a matrix| known a|
|00003020| 73 20 74 68 65 20 74 72 | 61 6e 73 66 6f 72 6d 61 |s the tr|ansforma|
|00003030| 74 69 6f 6e 20 6d 61 74 | 72 69 78 2e 20 20 54 68 |tion mat|rix. Th|
|00003040| 69 73 20 6d 61 74 72 69 | 78 20 6d 6f 64 69 66 69 |is matri|x modifi|
|00003050| 65 73 20 74 68 65 20 6f | 72 69 67 69 6e 61 6c 20 |es the o|riginal |
|00003060| 63 6f 6f 72 64 69 6e 61 | 74 65 73 20 73 6f 20 74 |coordina|tes so t|
|00003070| 68 61 74 20 74 68 65 79 | 20 61 70 70 65 61 72 20 |hat they| appear |
|00003080| 74 6f 20 62 65 20 72 6f | 74 61 74 65 64 20 6f 72 |to be ro|tated or|
|00003090| 20 6d 6f 76 65 64 2e 20 | 20 54 68 65 20 6d 61 74 | moved. | The mat|
|000030a0| 72 69 78 20 69 73 20 70 | 72 65 2d 6d 75 6c 74 69 |rix is p|re-multi|
|000030b0| 70 6c 69 65 64 20 62 79 | 20 74 68 65 20 68 6f 6d |plied by| the hom|
|000030c0| 6f 67 65 6e 65 6f 75 73 | 20 74 68 72 65 65 20 64 |ogeneous| three d|
|000030d0| 69 6d 65 6e 73 69 6f 6e | 61 6c 20 70 6f 69 6e 74 |imension|al point|
|000030e0| 20 74 6f 20 67 69 76 65 | 20 69 74 20 74 68 65 20 | to give| it the |
|000030f0| 65 66 66 65 63 74 20 6f | 66 20 74 68 65 20 74 72 |effect o|f the tr|
|00003100| 61 6e 73 66 6f 72 6d 61 | 74 69 6f 6e 73 2c 20 61 |ansforma|tions, a|
|00003110| 6e 64 20 74 68 65 6e 20 | 74 68 65 20 6d 6f 64 69 |nd then |the modi|
|00003120| 66 69 65 64 20 70 6f 69 | 6e 74 20 69 73 20 63 6f |fied poi|nt is co|
|00003130| 6e 76 65 72 74 65 64 20 | 69 6e 74 6f 20 73 63 72 |nverted |into scr|
|00003140| 65 65 6e 20 63 6f 6f 72 | 64 69 6e 61 74 65 73 20 |een coor|dinates |
|00003150| 77 68 69 63 68 20 63 61 | 6e 20 74 68 65 6e 20 62 |which ca|n then b|
|00003160| 65 20 64 69 73 70 6c 61 | 79 65 64 2e 20 20 41 6c |e displa|yed. Al|
|00003170| 6c 20 6f 70 74 69 6f 6e | 73 20 69 6e 20 74 68 65 |l option|s in the|
|00003180| 20 44 72 61 77 20 4d 65 | 6e 75 2c 20 61 73 20 77 | Draw Me|nu, as w|
|00003190| 65 6c 6c 20 61 73 20 73 | 6f 6d 65 20 6f 66 20 74 |ell as s|ome of t|
|000031a0| 68 65 20 73 63 72 65 65 | 6e 20 65 64 69 74 69 6e |he scree|n editin|
|000031b0| 67 20 6f 70 74 69 6f 6e | 73 2c 20 61 66 66 65 63 |g option|s, affec|
|000031c0| 74 20 74 68 69 73 20 6d | 61 74 72 69 78 2e 00 00 |t this m|atrix...|
|000031d0| 00 01 f6 54 68 69 73 20 | 6f 70 74 69 6f 6e 73 20 |...This |options |
|000031e0| 64 69 73 70 6c 61 79 73 | 20 61 20 6e 6f 6e 2d 65 |displays| a non-e|
|000031f0| 64 69 74 61 62 6c 65 20 | 77 69 6e 64 6f 77 20 74 |ditable |window t|
|00003200| 68 61 74 20 68 6f 6c 64 | 73 20 74 68 65 20 61 74 |hat hold|s the at|
|00003210| 6f 6d 73 20 61 6e 64 20 | 74 68 65 69 72 20 63 6f |oms and |their co|
|00003220| 72 72 65 73 70 6f 6e 64 | 69 6e 67 20 63 6f 6e 6e |rrespond|ing conn|
|00003230| 65 63 74 69 76 69 74 79 | 2e 20 20 0d 0d 42 79 20 |ectivity|. ..By |
|00003240| 70 72 65 73 73 69 6e 67 | 20 74 68 65 20 50 72 69 |pressing| the Pri|
|00003250| 6e 74 20 62 75 74 74 6f | 6e 2c 20 61 20 63 6f 70 |nt butto|n, a cop|
|00003260| 79 20 6f 66 20 74 68 69 | 73 20 74 61 62 6c 65 20 |y of thi|s table |
|00003270| 77 69 6c 6c 20 62 65 20 | 70 72 69 6e 74 65 64 20 |will be |printed |
|00003280| 74 6f 20 74 68 65 20 70 | 72 69 6e 74 65 72 2e 20 |to the p|rinter. |
|00003290| 20 4f 6e 20 61 20 31 32 | 38 4b 20 4d 61 63 69 6e | On a 12|8K Macin|
|000032a0| 74 6f 73 68 2c 20 74 68 | 69 73 20 6f 70 74 69 6f |tosh, th|is optio|
|000032b0| 6e 20 77 69 6c 6c 20 72 | 65 61 64 20 53 70 6f 6f |n will r|ead Spoo|
|000032c0| 6c 20 43 6f 6e 6e 65 63 | 74 69 6f 6e 20 54 61 62 |l Connec|tion Tab|
|000032d0| 6c 65 c9 2c 20 61 6e 64 | 20 69 74 20 77 69 6c 6c |le., and| it will|
|000032e0| 20 63 72 65 61 74 65 20 | 61 20 73 70 6f 6f 6c 65 | create |a spoole|
|000032f0| 64 20 70 72 69 6e 74 20 | 66 69 6c 65 20 6f 6e 20 |d print |file on |
|00003300| 74 68 65 20 64 69 73 6b | 2c 20 77 68 69 63 68 20 |the disk|, which |
|00003310| 6d 61 79 20 62 65 20 70 | 72 69 6e 74 65 64 20 61 |may be p|rinted a|
|00003320| 66 74 65 72 20 71 75 69 | 74 74 69 6e 67 20 4d 6f |fter qui|tting Mo|
|00003330| 6c 65 63 75 6c 61 72 20 | 45 64 69 74 6f 72 2e 20 |lecular |Editor. |
|00003340| 20 54 68 65 20 66 69 6c | 65 20 77 69 6c 6c 20 62 | The fil|e will b|
|00003350| 65 20 6e 61 6d 65 64 20 | 27 6d 6f 6c 65 63 75 6c |e named |'molecul|
|00003360| 65 27 2e 43 6f 6e 6e 65 | 63 74 20 61 6e 64 20 63 |e'.Conne|ct and c|
|00003370| 61 6e 20 62 65 20 70 72 | 69 6e 74 65 64 20 62 79 |an be pr|inted by|
|00003380| 20 73 65 6c 65 63 74 69 | 6e 67 20 74 68 65 20 69 | selecti|ng the i|
|00003390| 63 6f 6e 20 69 6e 20 74 | 68 65 20 46 69 6e 64 65 |con in t|he Finde|
|000033a0| 72 20 61 6e 64 20 63 68 | 6f 6f 73 69 6e 67 20 50 |r and ch|oosing P|
|000033b0| 72 69 6e 74 20 66 72 6f | 6d 20 74 68 65 20 46 69 |rint fro|m the Fi|
|000033c0| 6c 65 20 6d 65 6e 75 2e | 00 00 00 00 c6 44 65 73 |le menu.|.....Des|
|000033d0| 6b 20 41 63 63 65 73 73 | 6f 72 69 65 73 20 6d 61 |k Access|ories ma|
|000033e0| 79 20 62 65 20 61 63 63 | 65 73 73 65 64 20 69 6e |y be acc|essed in|
|000033f0| 20 4d 6f 6c 65 63 75 6c | 61 72 20 45 64 69 74 6f | Molecul|ar Edito|
|00003400| 72 20 62 79 20 73 65 6c | 65 63 74 69 6e 67 20 74 |r by sel|ecting t|
|00003410| 68 65 20 6f 6e 65 20 79 | 6f 75 20 77 61 6e 74 20 |he one y|ou want |
|00003420| 69 6e 20 74 68 65 20 41 | 70 70 6c 65 20 6d 65 6e |in the A|pple men|
|00003430| 75 2e 20 20 54 68 65 20 | 61 63 63 65 73 73 6f 72 |u. The |accessor|
|00003440| 69 65 73 20 77 68 69 63 | 68 20 61 72 65 20 69 6e |ies whic|h are in|
|00003450| 73 74 61 6c 6c 65 64 20 | 69 6e 20 74 68 65 20 61 |stalled |in the a|
|00003460| 63 74 69 76 65 20 73 79 | 73 74 65 6d 20 66 6f 6c |ctive sy|stem fol|
|00003470| 64 65 72 20 77 69 6c 6c | 20 61 70 70 65 61 72 20 |der will| appear |
|00003480| 69 6e 20 74 68 65 20 41 | 70 70 6c 65 20 6d 65 6e |in the A|pple men|
|00003490| 75 2e 00 00 00 02 24 59 | 6f 75 20 63 61 6e 20 66 |u.....$Y|ou can f|
|000034a0| 69 6e 64 20 68 65 6c 70 | 20 6f 6e 20 6d 61 6e 79 |ind help| on many|
|000034b0| 20 6f 66 20 74 68 65 20 | 64 69 66 66 65 72 65 6e | of the |differen|
|000034c0| 74 20 6f 70 74 69 6f 6e | 73 20 69 6e 20 4d 45 43 |t option|s in MEC|
|000034d0| 20 68 65 72 65 2e 20 20 | 42 79 20 73 65 6c 65 63 | here. |By selec|
|000034e0| 74 69 6e 67 20 61 6e 20 | 69 74 65 6d 20 69 6e 20 |ting an |item in |
|000034f0| 74 68 65 20 6c 65 66 74 | 20 73 69 64 65 20 6f 66 |the left| side of|
|00003500| 20 74 68 65 20 68 65 6c | 70 20 64 69 73 70 6c 61 | the hel|p displa|
|00003510| 79 2c 20 77 68 69 63 68 | 20 77 6f 72 6b 73 20 69 |y, which| works i|
|00003520| 6e 20 74 68 65 20 73 61 | 6d 65 20 6d 61 6e 6e 65 |n the sa|me manne|
|00003530| 72 20 61 73 20 74 68 65 | 20 73 74 61 6e 64 61 72 |r as the| standar|
|00003540| 64 20 6f 70 65 6e 20 62 | 6f 78 2c 20 74 68 65 20 |d open b|ox, the |
|00003550| 61 70 70 72 6f 70 72 69 | 61 74 65 20 68 65 6c 70 |appropri|ate help|
|00003560| 20 74 65 78 74 20 69 73 | 20 64 69 73 70 6c 61 79 | text is| display|
|00003570| 65 64 20 69 6e 20 74 68 | 65 20 72 69 67 68 74 20 |ed in th|e right |
|00003580| 68 61 6e 64 20 73 69 64 | 65 20 6f 66 20 74 68 65 |hand sid|e of the|
|00003590| 20 68 65 6c 70 20 77 69 | 6e 64 6f 77 2e 20 20 59 | help wi|ndow. Y|
|000035a0| 6f 75 20 6d 61 79 20 73 | 63 72 6f 6c 6c 20 74 68 |ou may s|croll th|
|000035b0| 72 6f 75 67 68 20 74 68 | 65 20 68 65 6c 70 20 75 |rough th|e help u|
|000035c0| 73 69 6e 67 20 74 68 65 | 20 73 63 72 6f 6c 6c 20 |sing the| scroll |
|000035d0| 62 61 72 2e 20 20 54 68 | 65 20 68 65 6c 70 20 77 |bar. Th|e help w|
|000035e0| 69 6c 6c 20 6e 6f 74 20 | 64 69 73 61 70 70 65 61 |ill not |disappea|
|000035f0| 72 20 75 6e 74 69 6c 20 | 61 6e 6f 74 68 65 72 20 |r until |another |
|00003600| 68 65 6c 70 20 69 74 65 | 6d 20 6f 72 20 74 68 65 |help ite|m or the|
|00003610| 20 43 61 6e 63 65 6c 20 | 62 75 74 74 6f 6e 20 69 | Cancel |button i|
|00003620| 73 20 73 65 6c 65 63 74 | 65 64 2e 20 20 54 6f 20 |s select|ed. To |
|00003630| 73 61 76 65 20 73 70 61 | 63 65 20 6f 6e 20 74 68 |save spa|ce on th|
|00003640| 65 20 64 69 73 6b 2c 20 | 74 68 65 20 68 65 6c 70 |e disk, |the help|
|00003650| 20 66 69 6c 65 20 63 61 | 6e 20 62 65 20 72 65 6d | file ca|n be rem|
|00003660| 6f 76 65 64 2c 20 62 75 | 74 20 74 68 69 73 20 72 |oved, bu|t this r|
|00003670| 65 73 75 6c 74 73 20 69 | 6e 20 6e 6f 74 20 68 61 |esults i|n not ha|
|00003680| 76 69 6e 67 20 61 6e 79 | 20 6f 6e 2d 6c 69 6e 65 |ving any| on-line|
|00003690| 20 68 65 6c 70 20 64 75 | 72 69 6e 67 20 74 68 65 | help du|ring the|
|000036a0| 20 65 78 65 63 75 74 69 | 6f 6e 20 6f 66 20 74 68 | executi|on of th|
|000036b0| 65 20 70 72 6f 67 72 61 | 6d 2e 00 00 00 01 0a 54 |e progra|m......T|
|000036c0| 68 69 73 20 6f 70 74 69 | 6f 6e 20 72 65 66 6c 65 |his opti|on refle|
|000036d0| 63 74 73 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 |cts the |molecule|
|000036e0| 20 74 68 72 6f 75 67 68 | 20 74 68 65 20 59 5a 20 | through| the YZ |
|000036f0| 70 6c 61 6e 65 2e 20 20 | 49 74 20 6e 65 67 61 74 |plane. |It negat|
|00003700| 65 73 20 74 68 65 20 58 | 20 63 6f 6f 72 64 69 6e |es the X| coordin|
|00003710| 61 74 65 73 20 66 6f 72 | 20 74 68 65 20 61 74 6f |ates for| the ato|
|00003720| 6d 73 20 69 6e 20 74 68 | 65 20 6d 6f 6c 65 63 75 |ms in th|e molecu|
|00003730| 6c 65 2e 20 20 49 66 20 | 61 74 6f 6d 73 20 61 72 |le. If |atoms ar|
|00003740| 65 20 73 65 6c 65 63 74 | 65 64 20 77 68 65 6e 20 |e select|ed when |
|00003750| 74 68 69 73 20 6f 70 74 | 69 6f 6e 20 69 73 20 63 |this opt|ion is c|
|00003760| 68 6f 73 65 6e 2c 20 74 | 68 65 6e 20 6f 6e 6c 79 |hosen, t|hen only|
|00003770| 20 74 68 6f 73 65 20 77 | 68 69 63 68 20 61 72 65 | those w|hich are|
|00003780| 20 73 65 6c 65 63 74 65 | 64 20 77 69 6c 6c 20 62 | selecte|d will b|
|00003790| 65 20 72 65 66 6c 65 63 | 74 65 64 2e 20 20 54 68 |e reflec|ted. Th|
|000037a0| 69 73 20 6f 70 74 69 6f | 6e 20 73 65 74 73 20 74 |is optio|n sets t|
|000037b0| 68 65 20 6d 6f 6c 65 63 | 75 6c 65 20 74 6f 20 49 |he molec|ule to I|
|000037c0| 64 65 6e 74 69 74 79 2e | 00 00 00 01 0a 54 68 69 |dentity.|.....Thi|
|000037d0| 73 20 6f 70 74 69 6f 6e | 20 72 65 66 6c 65 63 74 |s option| reflect|
|000037e0| 73 20 74 68 65 20 6d 6f | 6c 65 63 75 6c 65 20 74 |s the mo|lecule t|
|000037f0| 68 72 6f 75 67 68 20 74 | 68 65 20 58 5a 20 70 6c |hrough t|he XZ pl|
|00003800| 61 6e 65 2e 20 20 49 74 | 20 6e 65 67 61 74 65 73 |ane. It| negates|
|00003810| 20 74 68 65 20 59 20 63 | 6f 6f 72 64 69 6e 61 74 | the Y c|oordinat|
|00003820| 65 73 20 66 6f 72 20 74 | 68 65 20 61 74 6f 6d 73 |es for t|he atoms|
|00003830| 20 69 6e 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 | in the |molecule|
|00003840| 2e 20 20 49 66 20 61 74 | 6f 6d 73 20 61 72 65 20 |. If at|oms are |
|00003850| 73 65 6c 65 63 74 65 64 | 20 77 68 65 6e 20 74 68 |selected| when th|
|00003860| 69 73 20 6f 70 74 69 6f | 6e 20 69 73 20 63 68 6f |is optio|n is cho|
|00003870| 73 65 6e 2c 20 74 68 65 | 6e 20 6f 6e 6c 79 20 74 |sen, the|n only t|
|00003880| 68 6f 73 65 20 77 68 69 | 63 68 20 61 72 65 20 73 |hose whi|ch are s|
|00003890| 65 6c 65 63 74 65 64 20 | 77 69 6c 6c 20 62 65 20 |elected |will be |
|000038a0| 72 65 66 6c 65 63 74 65 | 64 2e 20 20 54 68 69 73 |reflecte|d. This|
|000038b0| 20 6f 70 74 69 6f 6e 20 | 73 65 74 73 20 74 68 65 | option |sets the|
|000038c0| 20 6d 6f 6c 65 63 75 6c | 65 20 74 6f 20 49 64 65 | molecul|e to Ide|
|000038d0| 6e 74 69 74 79 2e 00 00 | 00 01 0b 54 68 69 73 20 |ntity...|...This |
|000038e0| 6f 70 74 69 6f 6e 20 69 | 6e 76 65 72 74 73 20 74 |option i|nverts t|
|000038f0| 68 65 20 6d 6f 6c 65 63 | 75 6c 65 20 74 68 72 6f |he molec|ule thro|
|00003900| 75 67 68 20 74 68 65 20 | 6f 72 69 67 69 6e 2e 20 |ugh the |origin. |
|00003910| 20 49 74 20 6e 65 67 61 | 74 65 73 20 61 6c 6c 20 | It nega|tes all |
|00003920| 6f 66 20 74 68 65 20 63 | 6f 6f 72 64 69 6e 61 74 |of the c|oordinat|
|00003930| 65 73 20 66 6f 72 20 74 | 68 65 20 61 74 6f 6d 73 |es for t|he atoms|
|00003940| 20 69 6e 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 | in the |molecule|
|00003950| 2e 20 20 49 66 20 61 74 | 6f 6d 73 20 61 72 65 20 |. If at|oms are |
|00003960| 73 65 6c 65 63 74 65 64 | 20 77 68 65 6e 20 74 68 |selected| when th|
|00003970| 69 73 20 6f 70 74 69 6f | 6e 20 69 73 20 63 68 6f |is optio|n is cho|
|00003980| 73 65 6e 2c 20 74 68 65 | 6e 20 6f 6e 6c 79 20 74 |sen, the|n only t|
|00003990| 68 6f 73 65 20 77 68 69 | 63 68 20 61 72 65 20 73 |hose whi|ch are s|
|000039a0| 65 6c 65 63 74 65 64 20 | 77 69 6c 6c 20 62 65 20 |elected |will be |
|000039b0| 69 6e 76 65 72 74 65 64 | 2e 20 20 54 68 69 73 20 |inverted|. This |
|000039c0| 6f 70 74 69 6f 6e 20 73 | 65 74 73 20 74 68 65 20 |option s|ets the |
|000039d0| 6d 6f 6c 65 63 75 6c 65 | 20 74 6f 20 49 64 65 6e |molecule| to Iden|
|000039e0| 74 69 74 79 2e 00 00 00 | 01 0a 54 68 69 73 20 6f |tity....|..This o|
|000039f0| 70 74 69 6f 6e 20 72 65 | 66 6c 65 63 74 73 20 74 |ption re|flects t|
|00003a00| 68 65 20 6d 6f 6c 65 63 | 75 6c 65 20 74 68 72 6f |he molec|ule thro|
|00003a10| 75 67 68 20 74 68 65 20 | 58 59 20 70 6c 61 6e 65 |ugh the |XY plane|
|00003a20| 2e 20 20 49 74 20 6e 65 | 67 61 74 65 73 20 74 68 |. It ne|gates th|
|00003a30| 65 20 5a 20 63 6f 6f 72 | 64 69 6e 61 74 65 73 20 |e Z coor|dinates |
|00003a40| 66 6f 72 20 74 68 65 20 | 61 74 6f 6d 73 20 69 6e |for the |atoms in|
|00003a50| 20 74 68 65 20 6d 6f 6c | 65 63 75 6c 65 2e 20 20 | the mol|ecule. |
|00003a60| 49 66 20 61 74 6f 6d 73 | 20 61 72 65 20 73 65 6c |If atoms| are sel|
|00003a70| 65 63 74 65 64 20 77 68 | 65 6e 20 74 68 69 73 20 |ected wh|en this |
|00003a80| 6f 70 74 69 6f 6e 20 69 | 73 20 63 68 6f 73 65 6e |option i|s chosen|
|00003a90| 2c 20 74 68 65 6e 20 6f | 6e 6c 79 20 74 68 6f 73 |, then o|nly thos|
|00003aa0| 65 20 77 68 69 63 68 20 | 61 72 65 20 73 65 6c 65 |e which |are sele|
|00003ab0| 63 74 65 64 20 77 69 6c | 6c 20 62 65 20 72 65 66 |cted wil|l be ref|
|00003ac0| 6c 65 63 74 65 64 2e 20 | 20 54 68 69 73 20 6f 70 |lected. | This op|
|00003ad0| 74 69 6f 6e 20 73 65 74 | 73 20 74 68 65 20 6d 6f |tion set|s the mo|
|00003ae0| 6c 65 63 75 6c 65 20 74 | 6f 20 49 64 65 6e 74 69 |lecule t|o Identi|
|00003af0| 74 79 2e 00 00 00 01 8b | 54 68 69 73 20 69 74 65 |ty......|This ite|
|00003b00| 6d 20 74 6f 67 67 6c 65 | 73 20 62 65 74 77 65 65 |m toggle|s betwee|
|00003b10| 6e 20 53 74 61 72 74 20 | 61 6e 64 20 53 74 6f 70 |n Start |and Stop|
|00003b20| 2c 20 77 68 65 6e 20 73 | 65 6c 65 63 74 65 64 2e |, when s|elected.|
|00003b30| 20 20 57 68 65 6e 20 73 | 65 6c 65 63 74 69 6e 67 | When s|electing|
|00003b40| 20 53 74 61 72 74 2c 20 | 74 68 65 20 6f 74 68 65 | Start, |the othe|
|00003b50| 72 20 6f 70 74 69 6f 6e | 73 20 69 6e 20 74 68 65 |r option|s in the|
|00003b60| 20 41 6e 69 6d 61 74 69 | 6f 6e 20 6d 65 6e 75 20 | Animati|on menu |
|00003b70| 61 72 65 20 74 61 6b 65 | 6e 20 69 6e 74 6f 20 61 |are take|n into a|
|00003b80| 63 63 6f 75 6e 74 20 61 | 6e 64 20 74 68 65 20 66 |ccount a|nd the f|
|00003b90| 72 61 6d 65 73 20 61 72 | 65 20 74 68 65 6e 20 67 |rames ar|e then g|
|00003ba0| 65 6e 65 72 61 74 65 64 | 2c 20 69 66 20 6e 65 63 |enerated|, if nec|
|00003bb0| 65 73 73 61 72 79 2c 20 | 61 6e 64 20 71 75 69 63 |essary, |and quic|
|00003bc0| 6b 6c 79 20 64 69 73 70 | 6c 61 79 65 64 2e 20 20 |kly disp|layed. |
|00003bd0| 4e 6f 74 68 69 6e 67 20 | 65 6c 73 65 20 63 61 6e |Nothing |else can|
|00003be0| 20 62 65 20 64 6f 6e 65 | 20 64 75 72 69 6e 67 20 | be done| during |
|00003bf0| 61 6e 69 6d 61 74 69 6f | 6e 20 65 78 63 65 70 74 |animatio|n except|
|00003c00| 20 66 6f 72 20 73 65 6c | 65 63 74 69 6e 67 20 74 | for sel|ecting t|
|00003c10| 68 65 20 69 74 65 6d 73 | 20 69 6e 20 74 68 65 20 |he items| in the |
|00003c20| 41 6e 69 6d 61 74 69 6f | 6e 20 6d 65 6e 75 2e 20 |Animatio|n menu. |
|00003c30| 20 53 74 6f 70 20 77 69 | 6c 6c 20 63 61 6e 63 65 | Stop wi|ll cance|
|00003c40| 6c 20 74 68 65 20 64 69 | 73 70 6c 61 79 69 6e 67 |l the di|splaying|
|00003c50| 20 6f 66 20 66 72 61 6d | 65 73 2e 0d 0d 41 20 66 | of fram|es...A f|
|00003c60| 72 61 6d 65 20 69 73 20 | 61 6e 20 69 6d 61 67 65 |rame is |an image|
|00003c70| 20 6f 66 20 65 61 63 68 | 20 6d 6f 6c 65 63 75 6c | of each| molecul|
|00003c80| 65 2e 00 00 00 02 07 54 | 68 65 20 61 70 70 65 61 |e......T|he appea|
|00003c90| 72 61 6e 63 65 20 6f 66 | 20 74 68 65 20 61 74 6f |rance of| the ato|
|00003ca0| 6d 20 6d 61 79 20 62 65 | 20 63 68 61 6e 67 65 64 |m may be| changed|
|00003cb0| 20 62 79 20 65 69 74 68 | 65 72 20 63 68 61 6e 67 | by eith|er chang|
|00003cc0| 69 6e 67 20 74 68 65 20 | 61 74 6f 6d 20 70 61 74 |ing the |atom pat|
|00003cd0| 74 65 72 6e 20 6f 72 20 | 74 68 65 20 73 68 61 64 |tern or |the shad|
|00003ce0| 69 6e 67 20 6f 66 20 74 | 68 65 20 61 74 6f 6d 2e |ing of t|he atom.|
|00003cf0| 20 20 59 6f 75 20 6d 61 | 79 20 61 6c 73 6f 20 63 | You ma|y also c|
|00003d00| 68 61 6e 67 65 20 74 68 | 65 20 72 61 64 69 75 73 |hange th|e radius|
|00003d10| 20 6f 66 20 65 61 63 68 | 20 61 74 6f 6d 20 62 79 | of each| atom by|
|00003d20| 20 75 73 69 6e 67 20 61 | 20 72 65 73 6f 75 72 63 | using a| resourc|
|00003d30| 65 20 65 64 69 74 6f 72 | 20 61 6e 64 20 65 64 69 |e editor| and edi|
|00003d40| 74 69 6e 67 20 74 68 65 | 20 72 65 73 6f 75 72 63 |ting the| resourc|
|00003d50| 65 73 20 6f 66 20 74 79 | 70 65 20 22 41 54 4f 4d |es of ty|pe "ATOM|
|00003d60| 22 20 61 6e 64 20 63 68 | 61 6e 67 69 6e 67 20 74 |" and ch|anging t|
|00003d70| 68 65 20 72 61 64 69 75 | 73 2e 20 20 54 68 65 20 |he radiu|s. The |
|00003d80| 6c 61 74 74 65 72 20 6d | 61 79 20 6f 6e 6c 79 20 |latter m|ay only |
|00003d90| 62 65 20 64 6f 6e 65 20 | 65 78 74 65 72 6e 61 6c |be done |external|
|00003da0| 20 74 6f 20 74 68 65 20 | 70 72 6f 67 72 61 6d 2c | to the |program,|
|00003db0| 20 77 68 69 6c 65 20 74 | 68 65 20 6f 74 68 65 72 | while t|he other|
|00003dc0| 20 74 77 6f 20 63 61 6e | 20 62 65 20 64 6f 6e 65 | two can| be done|
|00003dd0| 20 77 69 74 68 69 6e 20 | 74 68 65 20 70 72 6f 67 | within |the prog|
|00003de0| 72 61 6d 2e 20 20 59 6f | 75 20 6d 61 79 20 61 6c |ram. Yo|u may al|
|00003df0| 73 6f 20 65 64 69 74 20 | 74 68 65 20 70 61 74 74 |so edit |the patt|
|00003e00| 65 72 6e 73 20 69 6e 20 | 61 20 72 65 73 6f 75 72 |erns in |a resour|
|00003e10| 63 65 20 65 64 69 74 6f | 72 2e 0d 54 68 65 20 70 |ce edito|r..The p|
|00003e20| 61 74 74 65 72 6e 73 20 | 72 65 6d 61 69 6e 20 74 |atterns |remain t|
|00003e30| 68 65 20 73 61 6d 65 20 | 66 72 6f 6d 20 6d 6f 6c |he same |from mol|
|00003e40| 65 63 75 6c 65 20 74 6f | 20 6d 6f 6c 65 63 75 6c |ecule to| molecul|
|00003e50| 65 20 61 6e 64 20 74 68 | 65 20 72 65 73 6f 75 72 |e and th|e resour|
|00003e60| 63 65 20 66 6f 72 20 74 | 68 65 20 70 61 74 74 65 |ce for t|he patte|
|00003e70| 72 6e 73 20 69 73 20 6b | 65 70 74 20 77 69 74 68 |rns is k|ept with|
|00003e80| 20 74 68 65 20 70 72 6f | 67 72 61 6d 2e 00 00 00 | the pro|gram....|
|00003e90| 02 3e 53 65 6c 65 63 74 | 69 6e 67 20 61 20 70 61 |.>Select|ing a pa|
|00003ea0| 72 74 20 6f 72 20 70 61 | 72 74 73 20 6f 66 20 74 |rt or pa|rts of t|
|00003eb0| 68 65 20 6d 6f 6c 65 63 | 75 6c 65 20 63 61 6e 20 |he molec|ule can |
|00003ec0| 62 65 20 64 6f 6e 65 20 | 62 79 20 63 6c 69 63 6b |be done |by click|
|00003ed0| 69 6e 67 20 28 6f 72 20 | 73 68 69 66 74 20 63 6c |ing (or |shift cl|
|00003ee0| 69 63 6b 69 6e 67 29 20 | 6f 6e 20 74 68 65 20 64 |icking) |on the d|
|00003ef0| 65 73 69 72 65 64 20 70 | 61 72 74 20 6f 72 20 62 |esired p|art or b|
|00003f00| 79 20 75 73 69 6e 67 20 | 74 68 65 20 73 65 6c 65 |y using |the sele|
|00003f10| 63 74 69 6f 6e 20 6d 61 | 72 71 75 65 65 20 74 6f |ction ma|rquee to|
|00003f20| 20 65 6e 63 6c 6f 73 65 | 20 74 68 65 20 64 65 73 | enclose| the des|
|00003f30| 69 72 65 64 20 70 6f 72 | 74 69 6f 6e 2e 20 20 57 |ired por|tion. W|
|00003f40| 68 65 6e 20 6a 75 73 74 | 20 63 6c 69 63 6b 69 6e |hen just| clickin|
|00003f50| 67 20 6f 6e 20 61 20 70 | 61 72 74 20 6f 66 20 74 |g on a p|art of t|
|00003f60| 68 65 20 6d 6f 6c 65 63 | 75 6c 65 2c 20 74 68 65 |he molec|ule, the|
|00003f70| 20 74 6f 70 6d 6f 73 74 | 20 65 6c 65 6d 65 6e 74 | topmost| element|
|00003f80| 20 77 69 6c 6c 20 62 65 | 20 73 65 6c 65 63 74 65 | will be| selecte|
|00003f90| 64 2c 20 65 76 65 6e 20 | 69 66 20 74 68 65 72 65 |d, even |if there|
|00003fa0| 20 69 73 20 73 6f 6d 65 | 74 68 69 6e 67 20 64 69 | is some|thing di|
|00003fb0| 72 65 63 74 6c 79 20 62 | 65 68 69 6e 64 20 69 74 |rectly b|ehind it|
|00003fc0| 2e 20 20 41 20 63 6c 69 | 63 6b 20 61 6e 64 20 64 |. A cli|ck and d|
|00003fd0| 72 61 67 20 6d 6f 76 65 | 6d 65 6e 74 20 6f 66 20 |rag move|ment of |
|00003fe0| 74 68 65 20 6d 6f 75 73 | 65 2c 20 75 73 69 6e 67 |the mous|e, using|
|00003ff0| 20 74 68 65 20 73 65 6c | 65 63 74 69 6f 6e 20 6d | the sel|ection m|
|00004000| 61 72 71 75 65 65 2c 20 | 77 69 6c 6c 20 73 65 6c |arquee, |will sel|
|00004010| 65 63 74 20 61 6c 6c 20 | 70 61 72 74 73 20 6f 66 |ect all |parts of|
|00004020| 20 74 68 65 20 6d 6f 6c | 65 63 75 6c 65 20 74 68 | the mol|ecule th|
|00004030| 61 74 20 69 6e 74 65 72 | 73 65 63 74 20 74 68 65 |at inter|sect the|
|00004040| 20 72 65 63 74 61 6e 67 | 6c 65 20 66 6f 72 6d 65 | rectang|le forme|
|00004050| 64 20 62 79 20 74 68 65 | 20 6d 61 72 71 75 65 65 |d by the| marquee|
|00004060| 2c 20 69 6e 63 6c 75 64 | 69 6e 67 20 61 6e 79 20 |, includ|ing any |
|00004070| 70 61 72 74 73 20 74 68 | 61 74 20 6d 61 79 20 62 |parts th|at may b|
|00004080| 65 20 6f 62 73 63 75 72 | 65 64 20 66 72 6f 6d 20 |e obscur|ed from |
|00004090| 76 69 65 77 2e 20 20 57 | 68 61 74 65 76 65 72 20 |view. W|hatever |
|000040a0| 77 61 73 20 73 65 6c 65 | 63 74 65 64 20 77 69 6c |was sele|cted wil|
|000040b0| 6c 20 62 65 20 6f 75 74 | 6c 69 6e 65 64 20 62 79 |l be out|lined by|
|000040c0| 20 22 6d 6f 76 69 6e 67 | 20 61 6e 74 73 2e 22 00 | "moving| ants.".|
|000040d0| 00 00 0b 0d 54 68 65 20 | 57 6f 72 6b 73 68 65 65 |....The |Workshee|
|000040e0| 74 20 69 73 20 74 68 65 | 20 77 69 6e 64 6f 77 20 |t is the| window |
|000040f0| 77 68 65 72 65 20 74 68 | 65 20 6d 6f 6c 65 63 75 |where th|e molecu|
|00004100| 6c 65 20 61 70 70 65 61 | 72 73 20 6f 6e 20 74 68 |le appea|rs on th|
|00004110| 65 20 73 63 72 65 65 6e | 20 61 6e 64 20 77 68 65 |e screen| and whe|
|00004120| 72 65 20 74 68 65 20 6f | 6e 2d 73 63 72 65 65 6e |re the o|n-screen|
|00004130| 20 65 64 69 74 69 6e 67 | 20 6f 66 20 74 68 65 20 | editing| of the |
|00004140| 6d 6f 6c 65 63 75 6c 65 | 20 6f 63 63 75 72 73 2e |molecule| occurs.|
|00004150| 20 20 54 68 69 73 20 77 | 69 6e 64 6f 77 20 63 6f | This w|indow co|
|00004160| 6e 74 61 69 6e 73 20 61 | 20 68 6f 72 69 7a 6f 6e |ntains a| horizon|
|00004170| 74 61 6c 20 73 63 72 6f | 6c 6c 20 62 61 72 20 77 |tal scro|ll bar w|
|00004180| 68 65 6e 20 74 68 65 20 | 77 69 6e 64 6f 77 20 69 |hen the |window i|
|00004190| 73 20 61 63 74 69 76 65 | 2d 20 74 68 61 74 20 69 |s active|- that i|
|000041a0| 73 2c 20 77 68 65 6e 20 | 69 74 20 69 73 20 70 6f |s, when |it is po|
|000041b0| 73 73 69 62 6c 65 20 74 | 6f 20 63 72 65 61 74 65 |ssible t|o create|
|000041c0| 2c 20 65 64 69 74 20 61 | 6e 64 20 76 69 65 77 20 |, edit a|nd view |
|000041d0| 61 20 6d 6f 6c 65 63 75 | 6c 65 2e 20 20 49 66 20 |a molecu|le. If |
|000041e0| 74 68 65 72 65 20 69 73 | 20 6a 75 73 74 20 6f 6e |there is| just on|
|000041f0| 65 20 6d 6f 6c 65 63 75 | 6c 65 20 74 68 61 74 20 |e molecu|le that |
|00004200| 69 73 20 69 6e 20 75 73 | 65 2c 20 74 68 65 6e 20 |is in us|e, then |
|00004210| 74 68 65 20 73 63 72 6f | 6c 6c 20 62 61 72 20 61 |the scro|ll bar a|
|00004220| 70 70 65 61 72 73 20 74 | 6f 20 73 68 6f 77 20 74 |ppears t|o show t|
|00004230| 68 61 74 20 74 68 65 72 | 65 20 69 73 20 61 20 6d |hat ther|e is a m|
|00004240| 6f 6c 65 63 75 6c 65 20 | 70 72 65 73 65 6e 74 2c |olecule |present,|
|00004250| 20 62 75 74 20 74 68 65 | 20 73 63 72 6f 6c 6c 20 | but the| scroll |
|00004260| 62 61 72 20 69 73 20 64 | 65 61 63 74 69 76 61 74 |bar is d|eactivat|
|00004270| 65 64 2e 20 20 57 68 65 | 6e 20 6d 6f 72 65 20 74 |ed. Whe|n more t|
|00004280| 68 61 6e 20 6f 6e 65 20 | 6d 6f 6c 65 63 75 6c 65 |han one |molecule|
|00004290| 20 69 73 20 70 72 65 73 | 65 6e 74 2c 20 74 68 65 | is pres|ent, the|
|000042a0| 20 73 63 72 6f 6c 6c 20 | 62 61 72 20 69 73 20 61 | scroll |bar is a|
|000042b0| 63 74 69 76 61 74 65 64 | 20 61 6e 64 20 79 6f 75 |ctivated| and you|
|000042c0| 20 6d 61 79 20 73 77 69 | 74 63 68 20 62 65 74 77 | may swi|tch betw|
|000042d0| 65 65 6e 20 6d 6f 6c 65 | 63 75 6c 65 73 20 62 79 |een mole|cules by|
|000042e0| 20 61 6c 74 65 72 69 6e | 67 20 74 68 65 20 76 61 | alterin|g the va|
|000042f0| 6c 75 65 20 6f 66 20 74 | 68 65 20 73 63 72 6f 6c |lue of t|he scrol|
|00004300| 6c 20 62 61 72 20 62 79 | 20 75 73 69 6e 67 20 74 |l bar by| using t|
|00004310| 68 65 20 73 63 72 6f 6c | 6c 20 62 6f 78 20 6f 72 |he scrol|l box or|
|00004320| 20 74 68 65 20 61 72 72 | 6f 77 73 2e 20 20 45 61 | the arr|ows. Ea|
|00004330| 63 68 20 6d 6f 6c 65 63 | 75 6c 65 20 68 61 73 20 |ch molec|ule has |
|00004340| 69 74 d5 73 20 6f 77 6e | 20 73 65 70 61 72 61 74 |it.s own| separat|
|00004350| 65 20 73 65 74 74 69 6e | 67 73 2e 0d 0d 54 68 65 |e settin|gs...The|
|00004360| 20 6d 6f 6c 65 63 75 6c | 65 20 6d 61 79 20 62 65 | molecul|e may be|
|00004370| 20 65 64 69 74 65 64 20 | 69 6e 20 74 68 69 73 20 | edited |in this |
|00004380| 77 69 6e 64 6f 77 20 75 | 73 69 6e 67 20 73 6f 6d |window u|sing som|
|00004390| 65 20 70 6f 77 65 72 66 | 75 6c 20 65 64 69 74 69 |e powerf|ul editi|
|000043a0| 6e 67 20 63 61 70 61 62 | 69 6c 69 74 69 65 73 2e |ng capab|ilities.|
|000043b0| 20 20 0d 42 79 20 64 6f | 75 62 6c 65 2d 63 6c 69 | .By do|uble-cli|
|000043c0| 63 6b 69 6e 67 2c 20 61 | 6e 20 61 74 6f 6d 20 6d |cking, a|n atom m|
|000043d0| 61 79 20 62 65 20 63 72 | 65 61 74 65 64 20 6f 72 |ay be cr|eated or|
|000043e0| 20 6d 6f 64 69 66 69 65 | 64 2c 20 64 65 70 65 6e | modifie|d, depen|
|000043f0| 64 69 6e 67 20 77 68 65 | 72 65 20 74 68 65 20 63 |ding whe|re the c|
|00004400| 6c 69 63 6b 20 6f 63 63 | 75 72 72 65 64 2e 20 20 |lick occ|urred. |
|00004410| 49 66 20 79 6f 75 20 64 | 6f 75 62 6c 65 2d 63 6c |If you d|ouble-cl|
|00004420| 69 63 6b 20 69 6e 20 61 | 6e 20 65 78 69 73 74 69 |ick in a|n existi|
|00004430| 6e 67 20 61 74 6f 6d 2c | 20 61 20 64 69 61 6c 6f |ng atom,| a dialo|
|00004440| 67 20 62 6f 78 20 77 69 | 6c 6c 20 61 70 70 65 61 |g box wi|ll appea|
|00004450| 72 20 77 68 69 63 68 20 | 77 69 6c 6c 20 65 6e 61 |r which |will ena|
|00004460| 62 6c 65 20 79 6f 75 20 | 74 6f 20 63 68 61 6e 67 |ble you |to chang|
|00004470| 65 20 74 68 65 20 61 74 | 6f 6d 20 6f 72 20 69 74 |e the at|om or it|
|00004480| d5 73 20 63 6f 6f 72 64 | 69 6e 61 74 65 73 20 6f |.s coord|inates o|
|00004490| 72 20 62 6f 74 68 2e 0d | 49 66 20 79 6f 75 20 64 |r both..|If you d|
|000044a0| 6f 75 62 6c 65 20 63 6c | 69 63 6b 20 69 6e 20 61 |ouble cl|ick in a|
|000044b0| 6e 20 61 72 65 61 20 74 | 68 61 74 20 64 6f 65 73 |n area t|hat does|
|000044c0| 20 6e 6f 74 20 63 6f 6e | 74 61 69 6e 20 61 6e 20 | not con|tain an |
|000044d0| 61 74 6f 6d 20 6f 72 20 | 62 6f 6e 64 2c 20 74 68 |atom or |bond, th|
|000044e0| 65 20 64 69 61 6c 6f 67 | 20 77 69 6e 64 6f 77 20 |e dialog| window |
|000044f0| 77 69 6c 6c 20 61 70 70 | 65 61 72 2c 20 62 75 74 |will app|ear, but|
|00004500| 20 77 69 74 68 20 61 20 | 27 2a 27 20 66 6f 72 20 | with a |'*' for |
|00004510| 74 68 65 20 61 74 6f 6d | 69 63 20 73 79 6d 62 6f |the atom|ic symbo|
|00004520| 6c 20 28 73 69 67 6e 69 | 66 79 69 6e 67 20 61 20 |l (signi|fying a |
|00004530| 70 6f 69 6e 74 20 6f 72 | 20 6e 6f 64 65 29 20 61 |point or| node) a|
|00004540| 6e 64 20 74 68 65 20 61 | 70 70 72 6f 78 69 6d 61 |nd the a|pproxima|
|00004550| 74 65 20 63 6f 6f 72 64 | 69 6e 61 74 65 73 20 6f |te coord|inates o|
|00004560| 66 20 74 68 65 20 70 6f | 69 6e 74 20 63 6c 69 63 |f the po|int clic|
|00004570| 6b 65 64 20 69 6e 20 74 | 68 65 20 58 59 20 70 6c |ked in t|he XY pl|
|00004580| 61 6e 65 20 77 69 74 68 | 20 74 68 65 20 5a 20 63 |ane with| the Z c|
|00004590| 6f 6f 72 64 69 6e 61 74 | 65 20 20 65 71 75 61 6c |oordinat|e equal|
|000045a0| 20 74 6f 20 7a 65 72 6f | 2e 0d 0d 59 6f 75 20 61 | to zero|...You a|
|000045b0| 6c 73 6f 20 6d 61 79 20 | 76 69 65 77 20 74 68 65 |lso may |view the|
|000045c0| 20 74 72 61 6e 73 66 6f | 72 6d 65 64 20 63 6f 6f | transfo|rmed coo|
|000045d0| 72 64 69 6e 61 74 65 73 | 20 2d 20 61 20 66 65 61 |rdinates| - a fea|
|000045e0| 74 75 72 65 20 73 69 6d | 69 6c 61 72 20 74 6f 20 |ture sim|ilar to |
|000045f0| 74 68 65 20 54 72 61 6e | 73 66 6f 72 6d 20 62 75 |the Tran|sform bu|
|00004600| 74 74 6f 6e 20 69 6e 20 | 74 68 65 20 45 64 69 74 |tton in |the Edit|
|00004610| 20 43 6f 6f 72 64 69 6e | 61 74 65 73 c9 ca 6d 65 | Coordin|ates..me|
|00004620| 6e 75 20 69 74 65 6d 2e | 20 20 49 66 20 74 68 69 |nu item.| If thi|
|00004630| 73 20 62 6f 78 20 69 73 | 20 63 68 65 63 6b 65 64 |s box is| checked|
|00004640| 20 61 6e 64 20 74 68 65 | 20 4f 4b 20 62 75 74 74 | and the| OK butt|
|00004650| 6f 6e 20 69 73 20 70 72 | 65 73 73 65 64 2c 20 74 |on is pr|essed, t|
|00004660| 68 65 6e 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 |hen the |molecule|
|00004670| 20 77 69 6c 6c 20 62 65 | 20 53 65 74 20 54 6f 20 | will be| Set To |
|00004680| 49 64 65 6e 74 69 74 79 | 2e 0d 54 68 69 73 20 6f |Identity|..This o|
|00004690| 70 74 69 6f 6e 20 77 6f | 72 6b 73 20 77 69 74 68 |ption wo|rks with|
|000046a0| 20 74 68 65 20 51 75 69 | 63 6b 20 27 4e 27 20 44 | the Qui|ck 'N' D|
|000046b0| 69 72 74 79 20 6f 70 74 | 69 6f 6e 2e 0d 0d 50 61 |irty opt|ion...Pa|
|000046c0| 72 74 20 6f 72 20 61 6c | 6c 20 6f 66 20 74 68 65 |rt or al|l of the|
|000046d0| 20 6d 6f 6c 65 63 75 6c | 65 20 6d 61 79 20 62 65 | molecul|e may be|
|000046e0| 20 6d 6f 76 65 64 20 6f | 6e 20 64 69 66 66 65 72 | moved o|n differ|
|000046f0| 65 6e 74 20 70 6c 61 6e | 65 73 2c 20 64 65 70 65 |ent plan|es, depe|
|00004700| 6e 64 69 6e 67 20 75 70 | 6f 6e 20 77 68 61 74 20 |nding up|on what |
|00004710| 6b 65 79 73 20 61 72 65 | 20 62 65 69 6e 67 20 68 |keys are| being h|
|00004720| 65 6c 64 20 64 6f 77 6e | 20 61 6e 64 20 75 73 69 |eld down| and usi|
|00004730| 6e 67 20 74 68 65 20 63 | 6c 69 63 6b 20 61 6e 64 |ng the c|lick and|
|00004740| 20 64 72 61 67 20 6d 6f | 74 69 6f 6e 20 6f 66 20 | drag mo|tion of |
|00004750| 74 68 65 20 6d 6f 75 73 | 65 2e 0d 0d 49 66 20 74 |the mous|e...If t|
|00004760| 68 65 20 4f 70 74 69 6f | 6e 20 6b 65 79 20 69 73 |he Optio|n key is|
|00004770| 20 70 72 65 73 73 65 64 | 20 77 68 69 6c 65 20 63 | pressed| while c|
|00004780| 6c 69 63 6b 69 6e 67 20 | 69 6e 20 61 20 73 65 6c |licking |in a sel|
|00004790| 65 63 74 65 64 20 70 6f | 72 74 69 6f 6e 20 6f 66 |ected po|rtion of|
|000047a0| 20 74 68 65 20 6d 6f 6c | 65 63 75 6c 65 2c 20 61 | the mol|ecule, a|
|000047b0| 6e 20 6f 75 74 6c 69 6e | 65 20 6f 66 20 74 68 65 |n outlin|e of the|
|000047c0| 20 73 65 6c 65 63 74 65 | 64 20 70 61 72 74 20 77 | selecte|d part w|
|000047d0| 69 6c 6c 20 66 6f 6c 6c | 6f 77 20 74 68 65 20 6d |ill foll|ow the m|
|000047e0| 6f 75 73 65 2c 20 61 6e | 64 20 74 68 65 20 6f 66 |ouse, an|d the of|
|000047f0| 66 73 65 74 20 66 72 6f | 6d 20 74 68 65 20 6f 72 |fset fro|m the or|
|00004800| 69 67 69 6e 61 6c 20 70 | 6f 69 6e 74 20 77 69 6c |iginal p|oint wil|
|00004810| 6c 20 61 70 70 65 61 72 | 20 69 6e 20 74 68 65 20 |l appear| in the |
|00004820| 6d 65 73 73 61 67 65 20 | 77 69 6e 64 6f 77 2e 20 |message |window. |
|00004830| 20 54 68 65 20 53 68 69 | 66 74 20 6b 65 79 20 77 | The Shi|ft key w|
|00004840| 69 6c 6c 20 68 6f 72 69 | 7a 6f 6e 74 61 6c 6c 79 |ill hori|zontally|
|00004850| 20 6f 72 20 76 65 72 74 | 69 63 61 6c 6c 79 20 63 | or vert|ically c|
|00004860| 6f 6e 73 74 72 61 69 6e | 20 74 68 65 20 6d 6f 76 |onstrain| the mov|
|00004870| 65 6d 65 6e 74 20 6f 66 | 20 74 68 65 20 6d 6f 6c |ement of| the mol|
|00004880| 65 63 75 6c 65 2e 20 49 | 66 20 62 6f 74 68 20 74 |ecule. I|f both t|
|00004890| 68 65 20 4f 70 74 69 6f | 6e 20 61 6e 64 20 43 6f |he Optio|n and Co|
|000048a0| 6d 6d 61 6e 64 20 6b 65 | 79 73 20 61 72 65 20 70 |mmand ke|ys are p|
|000048b0| 72 65 73 73 65 64 2c 20 | 74 68 65 6e 20 74 68 65 |ressed, |then the|
|000048c0| 6e 20 73 65 6c 65 63 74 | 65 64 20 70 61 72 74 73 |n select|ed parts|
|000048d0| 20 6f 66 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 | of the |molecule|
|000048e0| 20 77 69 6c 6c 20 74 72 | 61 76 65 6c 20 61 6c 6f | will tr|avel alo|
|000048f0| 6e 67 20 74 68 65 20 5a | 20 61 78 69 73 20 62 79 |ng the Z| axis by|
|00004900| 20 61 6e 20 61 6d 6f 75 | 6e 74 20 64 69 73 70 6c | an amou|nt displ|
|00004910| 61 79 65 64 20 69 6e 20 | 74 68 65 20 6d 65 73 73 |ayed in |the mess|
|00004920| 61 67 65 20 77 69 6e 64 | 6f 77 2e 20 20 42 79 20 |age wind|ow. By |
|00004930| 6d 6f 76 69 6e 67 20 74 | 68 65 20 6d 6f 75 73 65 |moving t|he mouse|
|00004940| 20 75 70 2c 20 74 68 65 | 20 70 61 72 74 73 20 77 | up, the| parts w|
|00004950| 69 6c 6c 20 62 65 20 70 | 75 73 68 65 64 20 62 61 |ill be p|ushed ba|
|00004960| 63 6b 20 61 6c 6f 6e 67 | 20 74 68 65 20 6e 65 67 |ck along| the neg|
|00004970| 61 74 69 76 65 20 5a 20 | 61 78 69 73 3b 20 20 62 |ative Z |axis; b|
|00004980| 79 20 6d 6f 76 69 6e 67 | 20 74 68 65 20 6d 6f 75 |y moving| the mou|
|00004990| 73 65 20 64 6f 77 6e 2c | 20 74 68 65 20 70 61 72 |se down,| the par|
|000049a0| 74 73 20 6f 66 20 74 68 | 65 20 6d 6f 6c 65 63 75 |ts of th|e molecu|
|000049b0| 6c 65 20 77 69 6c 6c 20 | 62 65 20 70 75 6c 6c 65 |le will |be pulle|
|000049c0| 64 20 66 6f 72 77 61 72 | 64 20 61 6c 6f 6e 67 20 |d forwar|d along |
|000049d0| 74 68 65 20 70 6f 73 69 | 74 69 76 65 20 5a 20 61 |the posi|tive Z a|
|000049e0| 78 69 73 2e 0d 0d 49 66 | 20 74 68 65 20 56 69 65 |xis...If| the Vie|
|000049f0| 77 69 6e 67 20 41 6e 67 | 6c 65 20 69 73 20 73 65 |wing Ang|le is se|
|00004a00| 74 20 74 6f 20 61 20 76 | 61 6c 75 65 20 6f 74 68 |t to a v|alue oth|
|00004a10| 65 72 20 74 68 61 6e 20 | 7a 65 72 6f 20 28 30 2e |er than |zero (0.|
|00004a20| 30 29 20 74 68 65 6e 20 | 74 68 65 20 6f 75 74 6c |0) then |the outl|
|00004a30| 69 6e 65 20 6f 66 20 74 | 68 65 20 69 6d 61 67 65 |ine of t|he image|
|00004a40| 20 77 69 6c 6c 20 6e 6f | 74 20 65 78 61 63 74 6c | will no|t exactl|
|00004a50| 79 20 6d 61 74 63 68 20 | 77 68 65 72 65 20 74 68 |y match |where th|
|00004a60| 65 20 69 6d 61 67 65 20 | 61 70 70 65 61 72 73 20 |e image |appears |
|00004a70| 6f 6e 20 74 68 65 20 73 | 63 72 65 65 6e 20 77 68 |on the s|creen wh|
|00004a80| 65 6e 20 74 68 65 20 6d | 6f 75 73 65 20 69 73 20 |en the m|ouse is |
|00004a90| 72 65 6c 65 61 73 65 64 | 2c 20 62 75 74 20 74 68 |released|, but th|
|00004aa0| 65 20 6f 66 66 73 65 74 | 20 69 73 20 73 74 69 6c |e offset| is stil|
|00004ab0| 6c 20 76 61 6c 69 64 2e | 0d 0d 42 6f 74 68 20 6f |l valid.|..Both o|
|00004ac0| 66 20 74 68 65 20 6f 70 | 74 69 6f 6e 73 20 73 65 |f the op|tions se|
|00004ad0| 74 20 74 68 65 20 6d 6f | 6c 65 63 75 6c 65 20 74 |t the mo|lecule t|
|00004ae0| 6f 20 49 64 65 6e 74 69 | 74 79 20 61 6e 64 20 61 |o Identi|ty and a|
|00004af0| 72 65 20 6e 6f 74 20 61 | 66 66 65 63 74 65 64 20 |re not a|ffected |
|00004b00| 62 79 20 74 68 65 20 51 | 75 69 63 6b 20 27 4e 27 |by the Q|uick 'N'|
|00004b10| 20 44 69 72 74 79 20 6f | 70 74 69 6f 6e 2e 0d 0d | Dirty o|ption...|
|00004b20| 42 79 20 73 65 6c 65 63 | 74 69 6e 67 20 70 61 72 |By selec|ting par|
|00004b30| 74 20 6f 66 20 74 68 65 | 20 6d 6f 6c 65 63 75 6c |t of the| molecul|
|00004b40| 65 20 61 6e 64 20 70 72 | 65 73 73 69 6e 67 20 74 |e and pr|essing t|
|00004b50| 68 65 20 42 61 63 6b 73 | 70 61 63 65 20 6b 65 79 |he Backs|pace key|
|00004b60| 2c 20 74 68 65 20 73 65 | 6c 65 63 74 65 64 20 70 |, the se|lected p|
|00004b70| 6f 72 74 69 6f 6e 20 69 | 73 20 72 65 6d 6f 76 65 |ortion i|s remove|
|00004b80| 64 20 66 72 6f 6d 20 74 | 68 65 20 6d 6f 6c 65 63 |d from t|he molec|
|00004b90| 75 6c 65 20 28 61 73 20 | 69 6e 20 74 68 65 20 43 |ule (as |in the C|
|00004ba0| 6c 65 61 72 20 6d 65 6e | 75 20 69 74 65 6d 29 2e |lear men|u item).|
|00004bb0| 20 20 54 68 69 73 20 6f | 70 65 72 61 74 65 73 20 | This o|perates |
|00004bc0| 77 69 74 68 20 74 68 65 | 20 51 75 69 63 6b 20 27 |with the| Quick '|
|00004bd0| 4e 27 20 44 69 72 74 79 | 20 6f 70 74 69 6f 6e 2e |N' Dirty| option.|
|00004be0| 00 00 00 01 0d 54 68 69 | 73 20 6d 65 6e 75 20 61 |.....Thi|s menu a|
|00004bf0| 6c 6c 6f 77 73 20 79 6f | 75 20 74 6f 20 61 6e 69 |llows yo|u to ani|
|00004c00| 6d 61 74 65 20 74 68 65 | 20 6d 6f 6c 65 63 75 6c |mate the| molecul|
|00004c10| 65 20 62 79 20 71 75 69 | 63 6b 6c 79 20 64 69 73 |e by qui|ckly dis|
|00004c20| 70 6c 61 79 69 6e 67 20 | 64 69 66 66 65 72 65 6e |playing |differen|
|00004c30| 74 20 66 72 61 6d 65 73 | 2e 20 20 54 68 65 20 64 |t frames|. The d|
|00004c40| 69 72 65 63 74 69 6f 6e | 20 61 6e 64 20 73 70 65 |irection| and spe|
|00004c50| 65 64 20 6f 66 20 74 68 | 65 20 61 6e 69 6d 61 74 |ed of th|e animat|
|00004c60| 69 6f 6e 20 63 61 6e 20 | 62 65 20 63 6f 6e 74 72 |ion can |be contr|
|00004c70| 6f 6c 6c 65 64 20 62 79 | 20 73 65 6c 65 63 74 69 |olled by| selecti|
|00004c80| 6e 67 20 69 74 65 6d 73 | 20 6f 6e 20 74 68 69 73 |ng items| on this|
|00004c90| 20 6d 65 6e 75 2e 0d 0d | 4f 6e 20 61 20 31 32 38 | menu...|On a 128|
|00004ca0| 4b 20 4d 61 63 69 6e 74 | 6f 73 68 2c 20 74 68 69 |K Macint|osh, thi|
|00004cb0| 73 20 6d 65 6e 75 20 77 | 69 6c 6c 20 6e 6f 74 20 |s menu w|ill not |
|00004cc0| 61 70 70 65 61 72 20 61 | 6e 64 20 6e 6f 6e 65 20 |appear a|nd none |
|00004cd0| 6f 66 20 69 74 d5 73 20 | 6f 70 74 69 6f 6e 73 20 |of it.s |options |
|00004ce0| 77 69 6c 6c 20 62 65 20 | 70 6f 73 73 69 62 6c 65 |will be |possible|
|00004cf0| 2e 00 00 00 01 4e 54 68 | 69 73 20 69 73 20 61 20 |.....NTh|is is a |
|00004d00| 66 61 69 72 6c 79 20 73 | 74 61 6e 64 61 72 64 20 |fairly s|tandard |
|00004d10| 45 64 69 74 20 6d 65 6e | 75 2e 20 20 49 74 20 69 |Edit men|u. It i|
|00004d20| 73 20 61 63 74 69 76 65 | 20 64 75 72 69 6e 67 20 |s active| during |
|00004d30| 75 73 65 20 6f 66 20 64 | 65 73 6b 20 61 63 65 73 |use of d|esk aces|
|00004d40| 73 6f 72 69 65 73 20 61 | 6e 64 20 74 68 72 6f 75 |sories a|nd throu|
|00004d50| 67 68 6f 75 74 20 76 61 | 72 69 6f 75 73 20 73 74 |ghout va|rious st|
|00004d60| 61 67 65 73 20 6f 66 20 | 74 68 65 20 70 72 6f 67 |ages of |the prog|
|00004d70| 72 61 6d 2e 20 59 6f 75 | 20 6d 61 79 20 61 6c 73 |ram. You| may als|
|00004d80| 6f 20 65 64 69 74 20 79 | 6f 75 72 20 6d 6f 6c 65 |o edit y|our mole|
|00004d90| 63 75 6c 65 20 77 69 74 | 68 20 74 68 65 20 45 64 |cule wit|h the Ed|
|00004da0| 69 74 20 43 6f 6f 72 64 | 69 6e 61 74 65 73 c9 20 |it Coord|inates. |
|00004db0| 73 65 6c 65 63 74 69 6f | 6e 20 69 6e 20 74 68 69 |selectio|n in thi|
|00004dc0| 73 20 6d 65 6e 75 2e 20 | 20 59 6f 75 20 6d 61 79 |s menu. | You may|
|00004dd0| 20 75 73 65 20 74 68 65 | 20 69 74 65 6d 73 20 69 | use the| items i|
|00004de0| 6e 20 74 68 69 73 20 6d | 65 6e 75 20 74 6f 20 63 |n this m|enu to c|
|00004df0| 6f 70 79 20 70 61 72 74 | 20 6f 72 20 61 6c 6c 20 |opy part| or all |
|00004e00| 6f 66 20 74 68 65 20 6d | 6f 6c 65 63 75 6c 65 20 |of the m|olecule |
|00004e10| 74 6f 20 6f 74 68 65 72 | 20 61 70 70 6c 69 63 61 |to other| applica|
|00004e20| 74 69 6f 6e 73 20 6f 72 | 20 74 6f 20 63 72 65 61 |tions or| to crea|
|00004e30| 74 65 20 6f 74 68 65 72 | 20 6d 6f 6c 65 63 75 6c |te other| molecul|
|00004e40| 65 73 2e 00 00 00 03 7c | 4d 6f 6c 65 63 75 6c 61 |es.....||Molecula|
|00004e50| 72 20 45 64 69 74 6f 72 | 20 28 4d 45 43 29 20 77 |r Editor| (MEC) w|
|00004e60| 61 73 20 77 72 69 74 74 | 65 6e 20 62 79 20 52 69 |as writt|en by Ri|
|00004e70| 63 6b 20 57 61 72 67 6f | 20 28 52 69 63 6b 65 72 |ck Wargo| (Ricker|
|00004e80| 73 29 20 61 6e 64 20 44 | 65 6e 6e 69 73 20 4d 63 |s) and D|ennis Mc|
|00004e90| 46 65 72 72 65 6e 20 28 | 44 65 6e 6e 79 53 6f 66 |Ferren (|DennySof|
|00004ea0| 74 29 2c 20 75 6e 64 65 | 72 20 74 68 65 20 73 75 |t), unde|r the su|
|00004eb0| 70 65 72 76 69 73 69 6f | 6e 20 6f 66 20 44 72 2e |pervisio|n of Dr.|
|00004ec0| 20 41 6c 6c 61 6e 20 53 | 6d 69 74 68 20 61 6e 64 | Allan S|mith and|
|00004ed0| 20 6f 66 20 74 68 65 20 | 53 6f 66 74 77 61 72 65 | of the |Software|
|00004ee0| 20 44 65 76 65 6c 6f 70 | 6d 65 6e 74 20 47 72 6f | Develop|ment Gro|
|00004ef0| 75 70 20 61 74 20 44 72 | 65 78 65 6c 20 55 6e 69 |up at Dr|exel Uni|
|00004f00| 76 65 72 73 69 74 79 2e | 0d 0d 22 49 20 77 6f 75 |versity.|.."I wou|
|00004f10| 6c 64 20 6c 69 6b 65 20 | 74 6f 20 67 69 76 65 20 |ld like |to give |
|00004f20| 6d 79 20 74 68 61 6e 6b | 73 20 74 6f 20 74 68 65 |my thank|s to the|
|00004f30| 20 66 6f 6c 6c 6f 77 69 | 6e 67 20 70 65 6f 70 6c | followi|ng peopl|
|00004f40| 65 20 66 6f 72 20 61 6c | 6c 20 68 65 6c 70 20 77 |e for al|l help w|
|00004f50| 69 74 68 20 4d 45 43 3a | 0d 44 72 2e 20 41 6c 6c |ith MEC:|.Dr. All|
|00004f60| 61 6e 20 53 6d 69 74 68 | 20 2d 20 66 6f 72 20 68 |an Smith| - for h|
|00004f70| 65 6c 70 69 6e 67 20 77 | 69 74 68 20 74 68 65 20 |elping w|ith the |
|00004f80| 64 65 73 69 67 6e 2c 20 | 64 65 62 75 67 67 69 6e |design, |debuggin|
|00004f90| 67 2c 20 64 6f 63 75 6d | 65 6e 74 61 74 69 6f 6e |g, docum|entation|
|00004fa0| 20 61 6e 64 20 74 65 73 | 74 69 6e 67 20 6f 66 20 | and tes|ting of |
|00004fb0| 4d 45 43 2e 0d 44 65 6e | 6e 69 73 20 4d 63 46 65 |MEC..Den|nis McFe|
|00004fc0| 72 72 65 6e 20 2d 20 66 | 6f 72 20 67 65 74 74 69 |rren - f|or getti|
|00004fd0| 6e 67 20 6d 65 20 74 6f | 20 70 72 6f 67 72 61 6d |ng me to| program|
|00004fe0| 20 61 20 62 69 74 20 66 | 61 73 74 65 72 20 61 6e | a bit f|aster an|
|00004ff0| 64 20 66 6f 72 20 68 69 | 73 20 67 72 65 61 74 6c |d for hi|s greatl|
|00005000| 79 20 61 70 70 72 65 63 | 69 61 74 65 64 20 61 6e |y apprec|iated an|
|00005010| 64 20 6e 65 65 64 65 64 | 20 68 65 6c 70 20 77 69 |d needed| help wi|
|00005020| 74 68 20 74 68 65 20 6c | 61 73 74 20 70 61 72 74 |th the l|ast part|
|00005030| 20 6f 66 20 4d 45 43 2e | 0d 47 65 6f 66 66 72 65 | of MEC.|.Geoffre|
|00005040| 79 20 45 67 61 6e 20 2d | 20 66 6f 72 20 68 65 6c |y Egan -| for hel|
|00005050| 70 69 6e 67 20 6d 65 20 | 67 72 69 6e 64 20 6f 75 |ping me |grind ou|
|00005060| 74 20 73 6f 6d 65 20 77 | 69 65 72 64 20 61 6c 67 |t some w|ierd alg|
|00005070| 6f 72 69 74 68 6d 73 20 | 61 6e 64 20 66 6f 72 20 |orithms |and for |
|00005080| 6b 65 65 70 69 6e 67 20 | 74 68 65 20 73 75 72 72 |keeping |the surr|
|00005090| 6f 75 6e 64 69 6e 67 73 | 20 6c 69 67 68 74 20 61 |oundings| light a|
|000050a0| 6e 64 20 68 61 70 70 79 | 2c 20 62 75 74 20 6e 6f |nd happy|, but no|
|000050b0| 74 20 6e 65 63 65 73 73 | 61 72 69 6c 79 20 69 6d |t necess|arily im|
|000050c0| 70 72 65 67 6e 61 62 6c | 65 2e 0d 52 69 63 68 20 |pregnabl|e..Rich |
|000050d0| 49 6e 61 63 6b 65 72 20 | 2d 20 66 6f 72 20 61 20 |Inacker |- for a |
|000050e0| 70 72 6f 67 72 61 6d 6d | 69 6e 67 20 63 6f 6d 70 |programm|ing comp|
|000050f0| 61 6e 69 6f 6e 2e 0d 4a | 69 6d 20 53 74 65 72 6c |anion..J|im Sterl|
|00005100| 69 6e 67 20 2d 20 66 6f | 72 20 67 65 74 74 69 6e |ing - fo|r gettin|
|00005110| 67 20 75 73 20 61 6c 6c | 20 74 6f 67 65 74 68 65 |g us all| togethe|
|00005120| 72 2e 0d 44 61 76 69 64 | 20 4c 69 6e 64 20 2d 20 |r..David| Lind - |
|00005130| 66 6f 72 20 64 6f 69 6e | 67 20 6a 6f 62 73 20 74 |for doin|g jobs t|
|00005140| 68 61 74 20 49 20 64 69 | 64 6e d5 74 20 68 61 76 |hat I di|dn.t hav|
|00005150| 65 20 74 69 6d 65 20 74 | 6f 20 64 6f 2e 22 0d 0d |e time t|o do."..|
|00005160| 20 20 20 20 20 20 20 20 | 20 20 20 20 20 20 20 20 | | |
|00005170| 20 20 20 20 20 20 20 20 | 20 20 20 20 20 20 20 20 | | |
|00005180| 20 20 20 20 20 20 20 20 | 20 20 20 20 52 69 63 6b | | Rick|
|00005190| 65 72 73 0d 0d 4d 45 43 | 20 2d 20 54 68 65 20 4d |ers..MEC| - The M|
|000051a0| 6f 6c 65 63 75 6c 61 72 | 20 45 64 69 74 6f 72 20 |olecular| Editor |
|000051b0| 66 6f 72 20 74 68 65 20 | 72 65 73 74 20 6f 66 20 |for the |rest of |
|000051c0| 75 73 c9 00 00 00 00 01 | 00 00 00 04 80 41 70 70 |us......|.....App|
|000051d0| 6c 65 20 4d 65 6e 75 0d | 20 20 48 65 6c 70 0d 20 |le Menu.| Help. |
|000051e0| 20 44 65 73 6b 20 41 63 | 63 65 73 73 6f 72 69 65 | Desk Ac|cessorie|
|000051f0| 73 0d 46 69 6c 65 20 4d | 65 6e 75 0d 20 20 4e 65 |s.File M|enu. Ne|
|00005200| 77 0d 20 20 4f 70 65 6e | c9 0d 20 20 43 6c 6f 73 |w. Open|.. Clos|
|00005210| 65 0d 20 20 53 61 76 65 | 0d 20 20 53 61 76 65 20 |e. Save|. Save |
|00005220| 41 73 c9 0d 20 20 52 65 | 76 65 72 74 20 54 6f 20 |As.. Re|vert To |
|00005230| 53 61 76 65 64 0d 20 20 | 50 61 67 65 20 53 65 74 |Saved. |Page Set|
|00005240| 75 70 c9 0d 20 20 50 72 | 69 6e 74 20 4d 6f 6c 65 |up.. Pr|int Mole|
|00005250| 63 75 6c 65 c9 0d 20 20 | 50 72 69 6e 74 20 43 6f |cule.. |Print Co|
|00005260| 6f 72 64 69 6e 61 74 65 | 20 54 61 62 6c 65 c9 0d |ordinate| Table..|
|00005270| 20 20 50 72 69 6e 74 20 | 43 6f 6e 6e 65 63 74 69 | Print |Connecti|
|00005280| 6f 6e 20 54 61 62 6c 65 | c9 0d 20 20 51 75 69 74 |on Table|.. Quit|
|00005290| 0d 45 64 69 74 20 4d 65 | 6e 75 0d 20 20 55 6e 64 |.Edit Me|nu. Und|
|000052a0| 6f 0d 20 20 43 75 74 0d | 20 20 43 6f 70 79 0d 20 |o. Cut.| Copy. |
|000052b0| 20 50 61 73 74 65 0d 20 | 20 43 6c 65 61 72 0d 20 | Paste. | Clear. |
|000052c0| 20 53 65 6c 65 63 74 20 | 41 6c 6c 0d 20 20 45 64 | Select |All. Ed|
|000052d0| 69 74 20 43 6f 6f 72 64 | 69 6e 61 74 65 73 c9 0d |it Coord|inates..|
|000052e0| 20 20 53 68 6f 77 20 43 | 6c 69 70 62 6f 61 72 64 | Show C|lipboard|
|000052f0| 0d 44 72 61 77 20 4d 65 | 6e 75 0d 20 20 53 65 74 |.Draw Me|nu. Set|
|00005300| 74 69 6e 67 73 0d 20 20 | 51 75 69 63 6b 20 27 4e |tings. |Quick 'N|
|00005310| 27 20 44 69 72 74 79 0d | 20 20 53 63 61 6c 65 20 |' Dirty.| Scale |
|00005320| 4d 6f 64 65 6c 0d 20 20 | 53 63 61 6c 65 20 41 74 |Model. |Scale At|
|00005330| 6f 6d 20 52 61 64 69 75 | 73 0d 20 20 56 69 65 77 |om Radiu|s. View|
|00005340| 69 6e 67 20 41 6e 67 6c | 65 0d 4d 6f 76 65 20 4d |ing Angl|e.Move M|
|00005350| 65 6e 75 0d 20 20 52 6f | 74 61 74 65 0d 20 20 52 |enu. Ro|tate. R|
|00005360| 6f 74 61 74 65 20 53 65 | 74 74 69 6e 67 73 0d 20 |otate Se|ttings. |
|00005370| 20 4d 6f 76 65 20 41 74 | 6f 6d 20 54 6f 20 4f 72 | Move At|om To Or|
|00005380| 69 67 69 6e 0d 20 20 4d | 6f 76 65 20 42 6f 6e 64 |igin. M|ove Bond|
|00005390| 20 54 6f 20 58 20 41 78 | 69 73 0d 20 20 52 6f 74 | To X Ax|is. Rot|
|000053a0| 61 74 65 20 49 6e 74 6f | 20 58 59 20 50 6c 61 6e |ate Into| XY Plan|
|000053b0| 65 0d 20 20 49 6e 76 65 | 72 74 20 74 68 72 75 20 |e. Inve|rt thru |
|000053c0| 4f 72 69 67 69 6e 0d 20 | 20 52 65 66 6c 65 63 74 |Origin. | Reflect|
|000053d0| 20 74 68 72 75 20 58 59 | 0d 20 20 52 65 66 6c 65 | thru XY|. Refle|
|000053e0| 63 74 20 74 68 72 75 20 | 58 5a 0d 20 20 52 65 66 |ct thru |XZ. Ref|
|000053f0| 6c 65 63 74 20 74 68 72 | 75 20 59 5a 0d 20 20 49 |lect thr|u YZ. I|
|00005400| 64 65 6e 74 69 74 79 0d | 20 20 53 65 74 20 54 6f |dentity.| Set To|
|00005410| 20 49 64 65 6e 74 69 74 | 79 0d 4d 65 61 73 75 72 | Identit|y.Measur|
|00005420| 65 20 4d 65 6e 75 0d 20 | 20 44 69 73 74 61 6e 63 |e Menu. | Distanc|
|00005430| 65 20 42 65 74 77 65 65 | 6e 20 41 74 6f 6d 73 0d |e Betwee|n Atoms.|
|00005440| 20 20 41 6e 67 6c 65 20 | 42 65 74 77 65 65 6e 20 | Angle |Between |
|00005450| 42 6f 6e 64 73 0d 20 20 | 54 6f 72 73 69 6f 6e 20 |Bonds. |Torsion |
|00005460| 41 6e 67 6c 65 0d 41 6e | 69 6d 61 74 69 6f 6e 20 |Angle.An|imation |
|00005470| 4d 65 6e 75 0d 20 20 53 | 74 61 72 74 20 28 53 74 |Menu. S|tart (St|
|00005480| 6f 70 29 0d 20 20 52 6f | 63 6b 69 6e 67 0d 20 20 |op). Ro|cking. |
|00005490| 46 6f 72 77 61 72 64 73 | 0d 20 20 42 61 63 6b 77 |Forwards|. Backw|
|000054a0| 61 72 64 73 0d 20 20 46 | 61 73 74 0d 20 20 4d 65 |ards. F|ast. Me|
|000054b0| 64 69 75 6d 0d 20 20 53 | 6c 6f 77 0d 20 20 57 72 |dium. S|low. Wr|
|000054c0| 61 70 61 72 6f 75 6e 64 | 0d 20 20 53 61 76 65 20 |aparound|. Save |
|000054d0| 49 6d 61 67 65 0d 57 69 | 6e 64 6f 77 73 0d 53 65 |Image.Wi|ndows.Se|
|000054e0| 6c 65 63 74 69 6f 6e 20 | 50 61 6c 65 74 74 65 0d |lection |Palette.|
|000054f0| 57 6f 72 6b 73 68 65 65 | 74 0d 43 6c 69 70 62 6f |Workshee|t.Clipbo|
|00005500| 61 72 64 0d 43 72 65 61 | 74 69 6e 67 20 4d 6f 6c |ard.Crea|ting Mol|
|00005510| 65 63 75 6c 65 73 0d 45 | 64 69 74 69 6e 67 20 4d |ecules.E|diting M|
|00005520| 6f 6c 65 63 75 6c 65 73 | 0d 56 69 65 77 69 6e 67 |olecules|.Viewing|
|00005530| 20 4d 6f 6c 65 63 75 6c | 65 73 0d 53 61 76 69 6e | Molecul|es.Savin|
|00005540| 67 20 4d 6f 6c 65 63 75 | 6c 65 73 0d 43 75 73 74 |g Molecu|les.Cust|
|00005550| 6f 6d 69 7a 69 6e 67 c9 | 0d 20 20 41 74 6f 6d 20 |omizing.|. Atom |
|00005560| 41 70 70 65 61 72 61 6e | 63 65 0d 20 20 42 6f 6e |Appearan|ce. Bon|
|00005570| 64 20 41 70 70 65 61 72 | 61 6e 63 65 0d 20 20 53 |d Appear|ance. S|
|00005580| 69 7a 65 20 6f 66 20 4d | 6f 6c 65 63 75 6c 65 0d |ize of M|olecule.|
|00005590| 20 20 43 75 72 72 65 6e | 74 20 41 74 6f 6d 73 0d | Curren|t Atoms.|
|000055a0| 4b 65 79 62 6f 61 72 64 | 0d 53 65 6c 65 63 74 69 |Keyboard|.Selecti|
|000055b0| 6e 67 0d 50 72 69 6e 74 | 69 6e 67 0d 4d 6f 6c 65 |ng.Print|ing.Mole|
|000055c0| 63 75 6c 65 20 4e 61 6d | 65 73 0d 54 68 72 65 65 |cule Nam|es.Three|
|000055d0| 20 44 69 6d 65 6e 73 69 | 6f 6e 73 0d 43 6f 6f 72 | Dimensi|ons.Coor|
|000055e0| 64 69 6e 61 74 65 20 54 | 61 62 6c 65 0d 43 6f 6e |dinate T|able.Con|
|000055f0| 6e 65 63 74 69 6f 6e 20 | 54 61 62 6c 65 0d 50 61 |nection |Table.Pa|
|00005600| 73 74 69 6e 67 20 69 6e | 20 61 20 54 61 62 6c 65 |sting in| a Table|
|00005610| 0d 4d 65 6d 6f 72 79 20 | 43 6f 6e 73 69 64 65 72 |.Memory |Consider|
|00005620| 61 74 69 6f 6e 73 0d 53 | 70 65 65 64 20 43 6f 6e |ations.S|peed Con|
|00005630| 73 69 64 65 72 61 74 69 | 6f 6e 73 0d 54 68 65 20 |siderati|ons.The |
|00005640| 50 72 6f 67 72 61 6d 6d | 65 72 73 c9 00 00 00 02 |Programm|ers.....|
|00005650| 84 54 68 69 73 20 6d 65 | 6e 75 20 61 6c 6c 6f 77 |.This me|nu allow|
|00005660| 20 74 68 65 20 75 73 65 | 72 20 74 6f 20 70 6f 73 | the use|r to pos|
|00005670| 69 74 69 6f 6e 20 74 68 | 65 20 6d 6f 6c 65 63 75 |ition th|e molecu|
|00005680| 6c 65 20 6f 6e 20 74 68 | 65 20 73 63 72 65 65 6e |le on th|e screen|
|00005690| 2e 20 20 57 69 74 68 20 | 74 68 65 20 72 6f 74 61 |. With |the rota|
|000056a0| 74 65 20 6f 70 74 69 6f | 6e 20 79 6f 75 20 63 61 |te optio|n you ca|
|000056b0| 6e 20 72 6f 74 61 74 65 | 20 74 68 65 20 6d 6f 6c |n rotate| the mol|
|000056c0| 65 63 75 6c 65 20 61 62 | 6f 75 74 20 75 70 20 74 |ecule ab|out up t|
|000056d0| 6f 20 74 68 72 65 65 20 | 61 78 65 73 2e 20 20 54 |o three |axes. T|
|000056e0| 68 69 73 20 63 61 6e 20 | 62 65 20 73 65 74 20 75 |his can |be set u|
|000056f0| 70 20 77 69 74 68 20 74 | 68 65 20 52 6f 74 61 74 |p with t|he Rotat|
|00005700| 65 20 73 65 74 74 69 6e | 67 73 20 6f 70 74 69 6f |e settin|gs optio|
|00005710| 6e 2e 20 20 59 6f 75 20 | 6d 61 79 20 61 6c 73 6f |n. You |may also|
|00005720| 20 63 68 61 6e 67 65 20 | 74 68 65 20 72 6f 74 61 | change |the rota|
|00005730| 74 69 6f 6e 20 69 6e 63 | 72 65 6d 65 6e 74 20 61 |tion inc|rement a|
|00005740| 6e 64 20 74 79 70 65 20 | 6f 66 20 72 6f 74 61 74 |nd type |of rotat|
|00005750| 69 6f 6e 20 77 69 74 68 | 69 6e 20 74 68 69 73 20 |ion with|in this |
|00005760| 6f 70 74 69 6f 6e 2e 20 | 20 46 6f 72 20 65 64 69 |option. | For edi|
|00005770| 74 69 6e 67 20 70 75 72 | 70 6f 73 65 73 20 79 6f |ting pur|poses yo|
|00005780| 75 20 6d 61 79 20 6d 6f | 76 65 20 61 6e 20 61 74 |u may mo|ve an at|
|00005790| 6f 6d 20 74 6f 20 74 68 | 65 20 6f 72 69 67 69 6e |om to th|e origin|
|000057a0| 20 28 74 68 65 20 63 65 | 6e 74 65 72 20 6f 66 20 | (the ce|nter of |
|000057b0| 74 68 65 20 73 63 72 65 | 65 6e 29 2c 20 61 6c 69 |the scre|en), ali|
|000057c0| 67 6e 20 61 20 62 6f 6e | 64 20 61 6c 6f 6e 67 20 |gn a bon|d along |
|000057d0| 74 68 65 20 58 20 61 78 | 69 73 2c 20 6f 72 20 72 |the X ax|is, or r|
|000057e0| 6f 74 61 74 65 20 61 6e | 20 61 74 6f 6d 20 69 6e |otate an| atom in|
|000057f0| 74 6f 20 74 68 65 20 58 | 59 20 70 6c 61 6e 65 2e |to the X|Y plane.|
|00005800| 20 20 50 61 72 74 20 6f | 72 20 61 6c 6c 20 6f 66 | Part o|r all of|
|00005810| 20 61 20 6d 6f 6c 65 63 | 75 6c 65 20 63 61 6e 20 | a molec|ule can |
|00005820| 62 65 20 72 65 66 6c 65 | 63 74 65 64 20 74 68 72 |be refle|cted thr|
|00005830| 6f 75 67 68 20 64 69 66 | 66 65 72 65 6e 74 20 70 |ough dif|ferent p|
|00005840| 6c 61 6e 65 73 20 77 69 | 74 68 20 74 68 65 20 52 |lanes wi|th the R|
|00005850| 65 66 6c 65 63 74 20 6f | 70 74 69 6f 6e 73 2e 20 |eflect o|ptions. |
|00005860| 20 57 69 74 68 20 74 68 | 65 20 49 64 65 6e 74 69 | With th|e Identi|
|00005870| 74 79 20 6f 70 74 69 6f | 6e 2c 20 79 6f 75 20 63 |ty optio|n, you c|
|00005880| 61 6e 20 73 65 74 20 74 | 68 65 20 6d 6f 6c 65 63 |an set t|he molec|
|00005890| 75 6c 65 20 62 61 63 6b | 20 74 6f 20 74 68 65 20 |ule back| to the |
|000058a0| 77 61 79 20 69 74 20 75 | 73 65 64 20 74 6f 20 61 |way it u|sed to a|
|000058b0| 70 70 65 61 72 20 77 69 | 74 68 20 74 68 65 20 6c |ppear wi|th the l|
|000058c0| 61 73 74 20 53 65 74 20 | 74 6f 20 49 64 65 6e 74 |ast Set |to Ident|
|000058d0| 69 74 79 2e 00 00 00 00 | 87 49 6e 20 74 68 69 73 |ity.....|.In this|
|000058e0| 20 6d 65 6e 75 20 79 6f | 75 20 63 61 6e 20 66 69 | menu yo|u can fi|
|000058f0| 6e 64 20 69 6e 66 6f 72 | 6d 61 74 69 6f 6e 20 61 |nd infor|mation a|
|00005900| 62 6f 75 74 20 74 68 65 | 20 70 72 6f 67 72 61 6d |bout the| program|
|00005910| 2c 20 68 65 6c 70 20 77 | 69 74 68 20 69 74 2c 20 |, help w|ith it, |
|00005920| 61 6e 64 20 74 68 65 20 | 64 65 73 6b 20 61 63 63 |and the |desk acc|
|00005930| 65 73 73 6f 72 69 65 73 | 20 74 68 61 74 20 61 72 |essories| that ar|
|00005940| 65 20 69 6e 73 74 61 6c | 6c 65 64 20 69 6e 20 74 |e instal|led in t|
|00005950| 68 65 20 53 79 73 74 65 | 6d 20 66 69 6c 65 2e 00 |he Syste|m file..|
|00005960| 00 00 01 ca 54 68 69 73 | 20 6f 70 74 69 6f 6e 20 |....This| option |
|00005970| 61 6c 6c 6f 77 73 20 74 | 68 65 20 75 73 65 72 20 |allows t|he user |
|00005980| 74 6f 20 67 65 74 20 61 | 20 70 69 63 74 6f 72 69 |to get a| pictori|
|00005990| 61 6c 20 68 61 72 64 63 | 6f 70 79 20 6f 66 20 74 |al hardc|opy of t|
|000059a0| 68 65 20 6d 6f 6c 65 63 | 75 6c 65 20 6f 6e 20 74 |he molec|ule on t|
|000059b0| 68 65 20 61 74 74 61 63 | 68 65 64 20 70 72 69 6e |he attac|hed prin|
|000059c0| 74 65 72 2e 20 20 49 74 | 20 73 75 70 70 6f 72 74 |ter. It| support|
|000059d0| 73 20 62 6f 74 68 20 49 | 6d 61 67 65 77 72 69 74 |s both I|magewrit|
|000059e0| 65 72 20 61 6e 64 20 4c | 61 73 65 72 57 72 69 74 |er and L|aserWrit|
|000059f0| 65 72 20 70 72 69 6e 74 | 65 72 73 2e 0d 0d 4f 6e |er print|ers...On|
|00005a00| 20 61 20 31 32 38 4b 20 | 4d 61 63 69 6e 74 6f 73 | a 128K |Macintos|
|00005a10| 68 2c 20 74 68 69 73 20 | 6f 70 74 69 6f 6e 20 77 |h, this |option w|
|00005a20| 69 6c 6c 20 72 65 61 64 | 20 53 70 6f 6f 6c 20 4d |ill read| Spool M|
|00005a30| 6f 6c 65 63 75 6c 65 c9 | 2c 20 61 6e 64 20 69 74 |olecule.|, and it|
|00005a40| 20 77 69 6c 6c 20 63 72 | 65 61 74 65 20 61 20 73 | will cr|eate a s|
|00005a50| 70 6f 6f 6c 65 64 20 70 | 72 69 6e 74 20 66 69 6c |pooled p|rint fil|
|00005a60| 65 20 6f 6e 20 74 68 65 | 20 64 69 73 6b 2c 20 77 |e on the| disk, w|
|00005a70| 68 69 63 68 20 6d 61 79 | 20 62 65 20 70 72 69 6e |hich may| be prin|
|00005a80| 74 65 64 20 61 66 74 65 | 72 20 79 6f 75 20 71 75 |ted afte|r you qu|
|00005a90| 69 74 20 4d 6f 6c 65 63 | 75 6c 61 72 20 45 64 69 |it Molec|ular Edi|
|00005aa0| 74 6f 72 2e 20 20 54 68 | 65 20 66 69 6c 65 20 77 |tor. Th|e file w|
|00005ab0| 69 6c 6c 20 62 65 20 6e | 61 6d 65 64 20 27 6d 6f |ill be n|amed 'mo|
|00005ac0| 6c 65 63 75 6c 65 27 2e | 50 69 63 74 75 72 65 20 |lecule'.|Picture |
|00005ad0| 61 6e 64 20 63 61 6e 20 | 62 65 20 70 72 69 6e 74 |and can |be print|
|00005ae0| 65 64 20 62 79 20 73 65 | 6c 65 63 74 69 6e 67 20 |ed by se|lecting |
|00005af0| 74 68 65 20 69 63 6f 6e | 20 69 6e 20 74 68 65 20 |the icon| in the |
|00005b00| 46 69 6e 64 65 72 20 61 | 6e 64 20 63 68 6f 6f 73 |Finder a|nd choos|
|00005b10| 69 6e 67 20 50 72 69 6e | 74 20 66 72 6f 6d 20 74 |ing Prin|t from t|
|00005b20| 68 65 20 46 69 6c 65 20 | 6d 65 6e 75 2e 00 00 00 |he File |menu....|
|00005b30| 01 13 54 68 69 73 20 61 | 6c 6c 6f 77 73 20 79 6f |..This a|llows yo|
|00005b40| 75 20 74 6f 20 63 72 65 | 61 74 65 20 61 20 6e 65 |u to cre|ate a ne|
|00005b50| 77 20 6d 6f 6c 65 63 75 | 6c 65 2e 20 20 57 68 65 |w molecu|le. Whe|
|00005b60| 6e 20 79 6f 75 20 73 65 | 6c 65 63 74 20 4e 65 77 |n you se|lect New|
|00005b70| 2c 20 61 20 62 6c 61 6e | 6b 20 57 6f 72 6b 73 68 |, a blan|k Worksh|
|00005b80| 65 65 74 20 61 70 70 65 | 61 72 73 20 69 6e 20 77 |eet appe|ars in w|
|00005b90| 68 69 63 68 20 79 6f 75 | 20 63 61 6e 20 63 72 65 |hich you| can cre|
|00005ba0| 61 74 65 20 61 20 6d 6f | 6c 65 63 75 6c 65 2e 20 |ate a mo|lecule. |
|00005bb0| 20 54 68 69 73 20 73 68 | 65 65 74 20 69 73 20 70 | This sh|eet is p|
|00005bc0| 6c 61 63 65 64 20 61 66 | 74 65 72 20 74 68 65 20 |laced af|ter the |
|00005bd0| 63 75 72 72 65 6e 74 20 | 6f 6e 65 2e 20 20 49 66 |current |one. If|
|00005be0| 20 74 68 65 20 73 68 69 | 66 74 20 6b 65 79 20 69 | the shi|ft key i|
|00005bf0| 73 20 68 65 6c 64 20 64 | 6f 77 6e 20 77 68 65 6e |s held d|own when|
|00005c00| 20 73 65 6c 65 63 74 69 | 6e 67 20 4e 65 77 2c 20 | selecti|ng New, |
|00005c10| 61 20 6e 65 77 20 73 68 | 65 65 74 20 69 73 20 69 |a new sh|eet is i|
|00005c20| 6e 73 65 72 74 65 64 20 | 69 6e 20 66 72 6f 6e 74 |nserted |in front|
|00005c30| 20 6f 66 20 74 68 65 20 | 63 75 72 72 65 6e 74 20 | of the |current |
|00005c40| 6f 6e 65 2e 00 00 00 01 | 75 54 68 69 73 20 69 74 |one.....|uThis it|
|00005c50| 65 6d 20 61 6c 6c 6f 77 | 20 74 68 65 20 75 73 65 |em allow| the use|
|00005c60| 72 20 74 6f 20 70 61 73 | 74 65 20 77 68 61 74 65 |r to pas|te whate|
|00005c70| 76 65 72 20 69 73 20 73 | 74 6f 72 65 64 20 6f 6e |ver is s|tored on|
|00005c80| 20 74 68 65 20 63 6c 69 | 70 62 6f 61 72 64 20 69 | the cli|pboard i|
|00005c90| 6e 74 6f 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 |nto the |molecule|
|00005ca0| 2e 20 20 49 66 20 70 61 | 72 74 20 6f 66 20 61 20 |. If pa|rt of a |
|00005cb0| 6d 6f 6c 65 63 75 6c 65 | 20 77 61 73 20 70 72 65 |molecule| was pre|
|00005cc0| 76 69 6f 75 73 6c 79 20 | 63 6f 70 69 65 64 20 6f |viously |copied o|
|00005cd0| 6e 74 6f 20 74 68 65 20 | 63 6c 69 70 62 6f 61 72 |nto the |clipboar|
|00005ce0| 64 2c 20 74 68 65 6e 20 | 69 74 20 77 69 6c 6c 20 |d, then |it will |
|00005cf0| 62 65 20 70 61 73 74 65 | 64 20 69 6e 74 6f 20 74 |be paste|d into t|
|00005d00| 68 65 20 63 75 72 72 65 | 6e 74 20 6d 6f 6c 65 63 |he curre|nt molec|
|00005d10| 75 6c 65 20 77 69 74 68 | 20 74 68 65 20 63 6f 6f |ule with| the coo|
|00005d20| 72 64 69 6e 61 74 65 73 | 20 61 6e 64 20 63 6f 6e |rdinates| and con|
|00005d30| 6e 65 63 74 69 76 69 74 | 79 20 70 72 65 76 69 6f |nectivit|y previo|
|00005d40| 75 73 6c 79 20 73 61 76 | 65 64 2e 20 20 54 68 65 |usly sav|ed. The|
|00005d50| 20 63 6f 6f 72 64 69 6e | 61 74 65 73 20 61 72 65 | coordin|ates are|
|00005d60| 20 61 66 66 65 63 74 65 | 64 20 62 79 20 74 68 65 | affecte|d by the|
|00005d70| 20 63 75 72 72 65 6e 74 | 20 73 65 74 74 69 6e 67 | current| setting|
|00005d80| 73 2c 20 75 6e 6c 65 73 | 73 20 74 68 65 20 6f 70 |s, unles|s the op|
|00005d90| 74 69 6f 6e 20 6b 65 79 | 20 69 73 20 68 65 6c 64 |tion key| is held|
|00005da0| 20 64 6f 77 6e 20 77 68 | 65 6e 20 50 61 73 74 65 | down wh|en Paste|
|00005db0| 20 69 73 20 73 65 6c 65 | 63 74 65 64 2e 00 00 00 | is sele|cted....|
|00005dc0| 02 97 43 6f 70 79 20 70 | 6c 61 63 65 73 20 74 68 |..Copy p|laces th|
|00005dd0| 65 20 73 65 6c 65 63 74 | 65 64 20 70 6f 72 74 69 |e select|ed porti|
|00005de0| 6f 6e 20 6f 66 20 74 68 | 65 20 6d 6f 6c 65 63 75 |on of th|e molecu|
|00005df0| 6c 65 20 69 6e 74 6f 20 | 74 68 65 20 63 6c 69 70 |le into |the clip|
|00005e00| 62 6f 61 72 64 20 66 6f | 72 20 61 20 6c 61 74 65 |board fo|r a late|
|00005e10| 72 20 70 61 73 74 69 6e | 67 20 69 6e 74 6f 20 74 |r pastin|g into t|
|00005e20| 68 65 20 6d 6f 6c 65 63 | 75 6c 65 2e 20 20 54 68 |he molec|ule. Th|
|00005e30| 65 20 63 6f 6f 72 64 69 | 6e 61 74 65 73 20 73 61 |e coordi|nates sa|
|00005e40| 76 65 64 20 61 72 65 20 | 66 69 72 73 74 20 74 72 |ved are |first tr|
|00005e50| 61 6e 73 66 6f 72 6d 65 | 64 20 74 6f 20 74 68 65 |ansforme|d to the|
|00005e60| 20 61 63 74 75 61 6c 20 | 63 6f 6f 72 64 69 6e 61 | actual |coordina|
|00005e70| 74 65 73 20 62 65 66 6f | 72 65 20 62 65 69 6e 67 |tes befo|re being|
|00005e80| 20 70 6c 61 63 65 64 20 | 69 6e 20 74 68 65 20 63 | placed |in the c|
|00005e90| 6c 69 70 62 6f 61 72 64 | 2e 20 20 49 66 20 74 68 |lipboard|. If th|
|00005ea0| 65 20 6f 70 74 69 6f 6e | 20 6b 65 79 20 69 73 20 |e option| key is |
|00005eb0| 68 65 6c 70 20 64 6f 77 | 6e 20 77 68 65 6e 20 73 |help dow|n when s|
|00005ec0| 65 6c 65 63 74 69 6e 67 | 20 43 6f 70 79 2c 20 74 |electing| Copy, t|
|00005ed0| 68 65 20 63 6f 6f 72 64 | 69 6e 61 74 65 73 20 61 |he coord|inates a|
|00005ee0| 72 65 20 6e 6f 74 20 74 | 72 61 6e 73 66 6f 72 6d |re not t|ransform|
|00005ef0| 65 64 2e 0d 0d 4f 6e 20 | 61 20 4d 61 63 69 6e 74 |ed...On |a Macint|
|00005f00| 6f 73 68 20 77 69 74 68 | 20 6c 65 73 73 20 74 68 |osh with| less th|
|00005f10| 61 6e 20 32 34 30 4b 20 | 62 79 74 65 73 20 6f 66 |an 240K |bytes of|
|00005f20| 20 6d 65 6d 6f 72 79 20 | 61 6c 6c 6f 63 61 74 65 | memory |allocate|
|00005f30| 64 20 74 6f 20 74 68 65 | 20 61 70 70 6c 69 63 61 |d to the| applica|
|00005f40| 74 69 6f 6e 2c 20 61 20 | 70 69 63 74 75 72 65 20 |tion, a |picture |
|00005f50| 6f 66 20 74 68 65 20 6d | 6f 6c 65 63 75 6c 65 20 |of the m|olecule |
|00005f60| 77 69 6c 6c 20 62 65 20 | 73 61 76 65 64 20 74 68 |will be |saved th|
|00005f70| 61 74 20 6a 75 73 74 20 | 4d 6f 6c 65 63 75 6c 61 |at just |Molecula|
|00005f80| 72 20 45 64 69 74 6f 72 | 20 63 61 6e 20 72 65 61 |r Editor| can rea|
|00005f90| 64 2e 20 20 4f 6e 20 61 | 20 4d 61 63 20 77 69 74 |d. On a| Mac wit|
|00005fa0| 68 20 6d 6f 72 65 20 74 | 68 61 6e 20 32 34 30 4b |h more t|han 240K|
|00005fb0| 20 62 79 74 65 73 20 6f | 66 20 6d 65 6d 6f 72 79 | bytes o|f memory|
|00005fc0| 20 61 6c 6c 6f 63 61 74 | 65 64 20 74 6f 20 74 68 | allocat|ed to th|
|00005fd0| 65 20 61 70 70 6c 69 63 | 61 74 69 6f 6e 2c 20 61 |e applic|ation, a|
|00005fe0| 20 70 69 63 74 75 72 65 | 20 6f 66 20 74 68 65 20 | picture| of the |
|00005ff0| 6d 6f 6c 65 63 75 6c 65 | 20 77 69 6c 6c 20 62 65 |molecule| will be|
|00006000| 20 73 61 76 65 64 20 74 | 68 61 74 20 63 61 6e 20 | saved t|hat can |
|00006010| 62 65 20 70 61 73 74 65 | 64 20 69 6e 74 6f 20 6f |be paste|d into o|
|00006020| 74 68 65 72 20 61 70 70 | 6c 69 63 61 74 69 6f 6e |ther app|lication|
|00006030| 73 20 73 75 63 68 20 61 | 73 20 4d 61 63 50 61 69 |s such a|s MacPai|
|00006040| 6e 74 2c 20 4d 61 63 57 | 72 69 74 65 20 6f 72 20 |nt, MacW|rite or |
|00006050| 4d 61 63 44 72 61 77 2e | 00 00 00 02 3e 48 65 72 |MacDraw.|....>Her|
|00006060| 65 20 79 6f 75 20 6d 61 | 79 20 63 68 61 6e 67 65 |e you ma|y change|
|00006070| 20 74 68 65 20 72 65 6c | 61 74 69 76 65 20 73 69 | the rel|ative si|
|00006080| 7a 65 20 6f 66 20 74 68 | 65 20 61 74 6f 6d 69 63 |ze of th|e atomic|
|00006090| 20 72 61 64 69 69 20 69 | 6e 20 74 68 65 20 6d 6f | radii i|n the mo|
|000060a0| 6c 65 63 75 6c 65 2e 20 | 20 55 70 6f 6e 20 73 65 |lecule. | Upon se|
|000060b0| 6c 65 63 74 69 6e 67 20 | 74 68 69 73 20 69 74 65 |lecting |this ite|
|000060c0| 6d 2c 20 79 6f 75 20 73 | 65 65 20 74 77 6f 20 43 |m, you s|ee two C|
|000060d0| 61 72 62 6f 6e 20 61 74 | 6f 6d 73 20 61 74 74 61 |arbon at|oms atta|
|000060e0| 63 68 65 64 20 62 79 20 | 61 20 67 72 61 79 20 6c |ched by |a gray l|
|000060f0| 69 6e 65 2c 20 61 20 68 | 6f 72 69 7a 6f 6e 74 61 |ine, a h|orizonta|
|00006100| 6c 20 73 63 72 6f 6c 6c | 20 62 61 72 20 61 6e 64 |l scroll| bar and|
|00006110| 20 74 68 72 65 65 20 62 | 75 74 74 6f 6e 73 2e 20 | three b|uttons. |
|00006120| 20 57 68 65 6e 20 74 68 | 65 20 74 77 6f 20 62 6c | When th|e two bl|
|00006130| 61 63 6b 20 63 69 72 63 | 6c 65 73 20 74 6f 75 63 |ack circ|les touc|
|00006140| 68 2c 20 74 68 65 20 72 | 61 64 69 69 20 61 72 65 |h, the r|adii are|
|00006150| 20 64 72 61 77 6e 20 69 | 6e 20 74 68 65 20 57 6f | drawn i|n the Wo|
|00006160| 72 6b 73 68 65 65 74 20 | 77 69 74 68 20 6e 6f 20 |rksheet |with no |
|00006170| 73 63 61 6c 69 6e 67 20 | 66 61 63 74 6f 72 2e 20 |scaling |factor. |
|00006180| 20 54 68 65 20 72 65 6c | 61 74 69 76 65 20 73 69 | The rel|ative si|
|00006190| 7a 65 20 6f 66 20 74 68 | 65 20 61 74 6f 6d 69 63 |ze of th|e atomic|
|000061a0| 20 72 61 64 69 69 20 63 | 61 6e 20 62 65 20 69 6e | radii c|an be in|
|000061b0| 63 72 65 61 73 65 64 20 | 6f 72 20 64 65 63 72 65 |creased |or decre|
|000061c0| 61 73 65 64 20 62 79 20 | 75 73 69 6e 67 20 74 68 |ased by |using th|
|000061d0| 65 20 73 63 72 6f 6c 6c | 20 62 61 72 2e 20 20 54 |e scroll| bar. T|
|000061e0| 68 65 20 4f 72 69 67 69 | 6e 61 6c 20 62 75 74 74 |he Origi|nal butt|
|000061f0| 6f 6e 20 77 69 6c 6c 20 | 64 72 61 77 20 74 68 65 |on will |draw the|
|00006200| 20 61 74 6f 6d 73 20 77 | 69 74 68 20 6e 6f 20 73 | atoms w|ith no s|
|00006210| 63 61 6c 69 6e 67 20 66 | 61 63 74 6f 72 2e 20 20 |caling f|actor. |
|00006220| 54 68 65 20 4f 4b 20 62 | 75 74 74 6f 6e 20 70 65 |The OK b|utton pe|
|00006230| 72 66 6f 72 6d 73 20 74 | 68 65 20 73 65 6c 65 63 |rforms t|he selec|
|00006240| 74 65 64 20 73 63 61 6c | 69 6e 67 20 6f 6e 20 74 |ted scal|ing on t|
|00006250| 68 65 20 61 74 6f 6d 69 | 63 20 72 61 64 69 69 2c |he atomi|c radii,|
|00006260| 20 61 6e 64 20 74 68 65 | 20 43 61 6e 63 65 6c 20 | and the| Cancel |
|00006270| 62 75 74 74 6f 6e 20 6c | 65 61 76 65 73 20 74 68 |button l|eaves th|
|00006280| 65 20 70 72 65 76 69 6f | 75 73 20 73 63 61 6c 69 |e previo|us scali|
|00006290| 6e 67 20 69 6e 74 61 63 | 74 2e 00 00 00 01 c1 48 |ng intac|t......H|
|000062a0| 65 72 65 20 79 6f 75 20 | 6d 61 79 20 63 68 61 6e |ere you |may chan|
|000062b0| 67 65 20 74 68 65 20 73 | 69 7a 65 20 6f 66 20 74 |ge the s|ize of t|
|000062c0| 68 65 20 6d 6f 6c 65 63 | 75 6c 65 20 74 68 61 74 |he molec|ule that|
|000062d0| 20 61 70 70 65 61 72 73 | 20 69 6e 20 74 68 65 20 | appears| in the |
|000062e0| 57 6f 72 6b 73 68 65 65 | 74 2e 20 20 59 6f 75 20 |Workshee|t. You |
|000062f0| 77 69 6c 6c 20 73 65 65 | 20 61 20 77 69 6e 64 6f |will see| a windo|
|00006300| 77 20 77 69 74 68 20 61 | 20 77 69 72 65 66 72 61 |w with a| wirefra|
|00006310| 6d 65 20 69 6d 61 67 65 | 20 6f 66 20 74 68 65 20 |me image| of the |
|00006320| 6d 6f 6c 65 63 75 6c 65 | 20 69 6e 20 61 20 6d 69 |molecule| in a mi|
|00006330| 6e 61 74 75 72 65 20 57 | 6f 72 6b 73 68 65 65 74 |nature W|orksheet|
|00006340| 2c 20 77 68 69 63 68 20 | 69 73 20 73 63 61 6c 65 |, which |is scale|
|00006350| 64 20 61 63 63 6f 72 64 | 69 6e 67 6c 79 2c 20 61 |d accord|ingly, a|
|00006360| 6e 64 20 61 20 68 6f 72 | 69 7a 6f 6e 74 61 6c 20 |nd a hor|izontal |
|00006370| 73 63 72 6f 6c 6c 20 62 | 61 72 2e 20 20 42 79 20 |scroll b|ar. By |
|00006380| 61 64 76 61 6e 63 69 6e | 67 20 74 68 65 20 73 63 |advancin|g the sc|
|00006390| 72 6f 6c 6c 20 62 6f 78 | 20 74 6f 20 74 68 65 20 |roll box| to the |
|000063a0| 72 69 67 68 74 2c 20 74 | 68 65 20 6d 6f 6c 65 63 |right, t|he molec|
|000063b0| 75 6c 65 20 77 69 6c 6c | 20 67 72 6f 77 20 6c 61 |ule will| grow la|
|000063c0| 72 67 65 72 20 2d 20 74 | 6f 20 74 68 65 20 6c 65 |rger - t|o the le|
|000063d0| 66 74 2c 20 74 68 65 20 | 6d 6f 6c 65 63 75 6c 65 |ft, the |molecule|
|000063e0| 20 77 69 6c 6c 20 67 72 | 6f 77 20 73 6d 61 6c 6c | will gr|ow small|
|000063f0| 65 72 2e 20 20 42 79 20 | 63 6c 69 63 6b 69 6e 67 |er. By |clicking|
+--------+-------------------------+-------------------------+--------+--------+
Only 25.0 KB of data is shown above.